RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 SMYD5Q6GMV2 418 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 FUNDC1Q8IVP5 155 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 CELF2-AS1Q8N7Q2 184 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 MCFD2Q8NI22 146 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 NXNL1Q96CM4 212 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 LRCH3Q96II8 777 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 TSNARE1Q96NA8 513 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 QKIQ96PU8 341 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 MMP27Q9H306 513 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 CMTM6Q9NX76 183 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 DTLQ9NZJ0 730 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 GPD1P21695 349 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 DNAJB1P25685 340 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 OR2B6P58173 313 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 LSM3P62310 102 aaKnown RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 TARDBPQ13148 414 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 NFIXQ14938 502 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 MEP1AQ16819 746 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 RAB6CQ53S08 254 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 PNCKQ6P2M8 343 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 CES3Q6UWW8 571 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 BEND5Q7L4P6 421 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 ZBTB33Q86T24 672 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 GATAD2AQ86YP4 633 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 NAT16Q8N8M0 369 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 PSD4Q8NDX1 1056 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 OR9I1Q8NGQ6 314 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 RAB6CQ9H0N0 254 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 MRM3Q9HC36 420 aaKnown RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 PIH1D1Q9NWS0 290 aaKnown RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 PAQR5Q9NXK6 330 aaPredicted RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 DNMT3LQ9UJW3 386 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 ZFC3H1O60293 1989 aaKnown RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 SOAT2O75908 522 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 HPRP00739 348 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 CST3P01034 146 aaPredicted RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 GH2P01242 217 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 ALDH4A1P30038 563 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 CYP2C18P33260 490 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 PPP1R3AQ16821 1122 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 OTUD3Q5T2D3 398 aaPredicted RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 PTRH1Q86Y79 214 aaKnown RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 FSTL5Q8N475 847 aaPredicted RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 FBXL6Q8N531 539 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 CCDC185Q8N715 623 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 FAM83FQ8NEG4 500 aaPredicted RBP13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 SLC39A13Q96H72 371 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 RNF170Q96K19 258 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 SCYL1Q96KG9 808 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 CITED4Q96RK1 184 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 ZNF670Q9BS34 389 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 AS3MTQ9HBK9 375 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 TLK1Q9UKI8 766 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 NDUFAF1Q9Y375 327 aa13.3□□□□□ -0.28
SPTSSB-201ENST00000359175 ZNF487B1APH4 448 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 MED7O43513 233 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ARHGEF15O94989 841 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 C1QTNF8P60827 252 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 CCNA1P78396 465 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 CTU2Q2VPK5 515 aaKnown RBP13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 HEATR6Q6AI08 1181 aaKnown RBP13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 LAIR2Q6ISS4 152 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 CNSTQ6PJW8 725 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 PIWIL4Q7Z3Z4 852 aaKnown RBP13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 VN1R5Q7Z5H4 357 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 FAM35AQ86V20 835 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 CCNYL1Q8N7R7 359 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 RORBQ92753 470 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 PSKH2Q96QS6 385 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 AGAP2Q99490 1192 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ADPGKQ9BRR6 497 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 NIF3L1Q9GZT8 377 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 FAM118AQ9NWS6 357 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 A0A0A0MRY4 1105 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 SLC1A7O00341 560 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ARSAP15289 507 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 SLC6A2P23975 617 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 NR2C2P49116 596 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ACTR2P61160 394 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 NCS1P62166 190 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ZNF45Q02386 682 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 EPS8Q12929 822 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 TYSND1Q2T9J0 566 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ANO4Q32M45 955 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 NIPA1Q7RTP0 329 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 TRMT1LQ7Z2T5 733 aaKnown RBP13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 PODNQ7Z5L7 613 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ACVR1CQ8NER5 493 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 LILRB1Q8NHL6 650 aaPredicted RBP13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 BPIFB1Q8TDL5 484 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ZFYVE19Q96K21 471 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 SPATA13Q96N96 652 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 FEM1AQ9BSK4 669 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 IDI2Q9BXS1 227 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 NTN4Q9HB63 628 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 AGO4Q9HCK5 861 aaKnown RBP13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 ACOXLQ9NUZ1 547 aa13.29□□□□□ -0.28
SPTSSB-201ENST00000359175 GTSE1Q9NYZ3 720 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms