RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SMPD3Q9NY59 655 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PCSK1NQ9UHG2 260 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 KCND3Q9UK17 655 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZKSCAN5Q9Y2L8 839 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 R3HCC1Q9Y3T6 440 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 FRYQ5TBA9 3013 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CLRN2A0PK11 232 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CTAGE9A4FU28 777 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 BTBD18B2RXH4 712 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 NDUFS8O00217 210 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 AGRPO00253 132 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 MGEA5O60502 916 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CDKL5O76039 1030 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 DCNP07585 359 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 HOXB5P09067 269 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CTAGE8P0CG41 777 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 LYL1P12980 280 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 GP1BBP13224 206 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 STMN1P16949 149 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PRPH2P23942 346 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCT8P50990 548 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SMSP52788 366 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 RPA4Q13156 261 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SMC1AQ14683 1233 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 RNF151Q2KHN1 245 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCNJQ5T5M9 372 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM83HQ6ZRV2 1179 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 MTERF4Q7Z6M4 381 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CTAGE4Q8IX94 777 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 FBXL16Q8N461 479 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC38A9Q8NBW4 561 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 MDS2Q8NDY4 140 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CMASQ8NFW8 434 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 N4BP2L2Q92802 583 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 FERMT2Q96AC1 680 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZSCAN31Q96LW9 406 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TCEANC2Q96MN5 208 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PKP4Q99569 1192 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 GPA33Q99795 319 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SH3GL2Q99962 352 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 AATFQ9NY61 560 aaKnown RBP eCLIP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 FBXL17Q9UF56 701 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PHF24Q9UPV7 400 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SATB2Q9UPW6 733 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TNRC6BQ9UPQ9 1833 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ANKRD36A6QL64 1941 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CRB1P82279 1406 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 UBA6A0AVT1 1052 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 BTBD19C9JJ37 291 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PENKP01210 267 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 DBHP09172 617 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CPB1P15086 417 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZNF8P17098 575 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PAMP19021 973 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CPOXP36551 454 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SOX8P57073 446 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TFAP4Q01664 338 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 DEUP1Q05D60 604 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 C2orf76Q3KRA6 126 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZNF805Q5CZA5 627 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 C9orf152Q5JTZ5 239 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 BEND6Q5SZJ8 279 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PRSS55Q6UWB4 352 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 YTHDF3Q7Z739 585 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CATSPER1Q8NEC5 780 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 RSPRY1Q96DX4 576 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 NAF1Q96HR8 494 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 HNRNPABQ99729 332 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 NUDT16L1Q9BRJ7 211 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TNMDQ9H2S6 317 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMEM74BQ9NUR3 256 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 IL20Q9NYY1 176 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 POLLQ9UGP5 575 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PROB1E7EW31 1015 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CTAGE5O15320 804 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 RSL1D1O76021 490 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 GUCA1CO95843 209 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ALPPP05187 535 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ALPPL2P10696 532 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 IL32P24001 234 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCR3P51677 355 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PRELPP51888 382 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 EVCP57679 992 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 PPIAP62937 165 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 HOXA4Q00056 320 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 EXOSC9Q06265 439 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 ST3GAL1Q11201 340 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 FOXL1Q12952 345 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 RESTQ13127 1097 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SARM1Q6SZW1 724 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 RANBP10Q6VN20 620 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 GLDNQ6ZMI3 551 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 NBPF5PQ86XG9 351 aaPredicted RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 REPS2Q8NFH8 660 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SMG7Q92540 1137 aaKnown RBP1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 MIEF2Q96C03 454 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 SORT1Q99523 831 aa1.89□□□□□ -2.11
SMARCAD1-202ENST00000359052 RABEP2Q9H5N1 569 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms