RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 MYEOVQ96EZ4 313 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 DUS3LQ96G46 650 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 KLHL32Q96NJ5 620 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 FCRL3Q96P31 734 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 MRPL1Q9BYD6 325 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 PRDM12Q9H4Q4 367 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 ZNF576Q9H609 170 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 DDX18Q9NVP1 670 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 TXNDC16Q9P2K2 825 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 PACSIN3Q9UKS6 424 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 RNF11Q9Y3C5 154 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 CPQQ9Y646 472 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 H3BSA7 217 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 KLKB1P03952 638 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 APOA4P06727 396 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 ERVK-10P10266 1014 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 ATP6V1B1P15313 513 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 PTPN2P17706 415 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 CDK9P50750 372 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 RPL14P50914 215 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 ADARP55265 1226 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 SMAD3P84022 425 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 SEMA3BQ13214 749 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 TEAD2Q15562 447 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 CFAP52Q8N1V2 620 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 RCN3Q96D15 328 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 CELF6Q96J87 481 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 BIRC8Q96P09 236 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 HAUS8Q9BT25 410 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 IL22Q9GZX6 179 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 NDFIP2Q9NV92 336 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 VTI1BQ9UEU0 232 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 A0A096LPK6 155 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 E9PAM4 449 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 RNASEH2AO75792 299 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 STC2O76061 302 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 C8BP07358 591 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 MPSTP25325 297 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 CORO1AP31146 461 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 AIF1P55008 147 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 CSE1LP55060 971 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 DUSP6Q16828 381 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 GPR158Q5T848 1215 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 IRAK1BP1Q5VVH5 260 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 SEL1L3Q68CR1 1132 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 NADSYN1Q6IA69 706 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 FSTL4Q6MZW2 842 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 ZYG11AQ6WRX3 759 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 TFAP2DQ7Z6R9 452 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 TRIM74Q86UV6 250 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 TRIM73Q86UV7 250 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 CARM1Q86X55 608 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 PSTKQ8IV42 348 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 ATP6V0D2Q8N8Y2 350 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 BHMTQ93088 406 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 BTN2A3PQ96KV6 586 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 PLEKHG4BQ96PX9 1271 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 CDK5RAP1Q96SZ6 601 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 SLC46A2Q9BY10 475 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 WDR55Q9H6Y2 383 aaPredicted RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 LRRC40Q9H9A6 602 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 WDR41Q9HAD4 459 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 ZBTB26Q9HCK0 441 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 UTP6Q9NYH9 597 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 RSL24D1Q9UHA3 163 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 ZNHIT2Q9UHR6 403 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 MYOFQ9NZM1 2061 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 DOCK4Q8N1I0 1966 aa12.7□□□□□ -0.38
RTFDC1-202ENST00000357348 ZCWPW2A0A1B0GU75 182 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 MYOCOSA0A1B0GUC4 107 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 CCDC160A6NGH7 325 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 RNF103O00237 685 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 TRIM38O00635 465 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 PFDN1O60925 122 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 C2P06681 752 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 SBK3P0C264 359 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 SLC2A3P11169 496 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 PSMC3P17980 439 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 MLLT6P55198 1093 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 TUBA4AP68366 448 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 PRKAA1Q13131 559 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 TCEAL5Q5H9L2 206 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 NPWQ8N729 165 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 SMG7Q92540 1137 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 MRPL38Q96DV4 380 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 P2RY11Q96G91 374 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 UHRF1Q96T88 793 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 C1QTNF1Q9BXJ1 281 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 CEP41Q9BYV8 373 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 EFCAB1Q9HAE3 211 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 CCL26Q9Y258 94 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 RPS6KL1Q9Y6S9 549 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 BRWD1Q9NSI6 2320 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 C7orf72A4D263 438 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 TCAF2A6NFQ2 919 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 TRIM64CA6NLI5 447 aa12.69□□□□□ -0.38
RTFDC1-202ENST00000357348 TSPAN3O60637 253 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms