RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 NPAS4Q8IUM7 802 aa22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 TOP1MTQ969P6 601 aa22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 POLR3BQ9NW08 1133 aaPredicted RBP22.24■■□□□ 1.15
NKX2-1-201ENST00000354822 INSIG1O15503 277 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 PSMA3P25788 255 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 GATMP50440 423 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 AQP4P55087 323 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 MS4A2Q01362 244 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 LRP8Q14114 963 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 SEMA3AQ14563 771 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 PTPRCAPQ14761 206 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 GPNMBQ14956 572 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 TAF1AQ15573 450 aaPredicted RBP22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 GRAMD1BQ3KR37 738 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 RPS27LQ71UM5 84 aaKnown RBP22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 FBXO22Q8NEZ5 403 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 BHLHE22Q8NFJ8 381 aaPredicted RBP22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 OR7D4Q8NG98 312 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 PLD4Q96BZ4 506 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 SPON2Q9BUD6 331 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 DTNAQ9Y4J8 743 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 ASB3Q9Y575 518 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 PCDHGA7Q9Y5G6 932 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 BPTFQ12830 3046 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 ILVBLA1L0T0 632 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 C2orf81A6NN90 581 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 ACOT8O14734 319 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 NAA20P61599 178 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 AFTPHQ6ULP2 937 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 FAM126BQ8IXS8 530 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 RYBPQ8N488 228 aaPredicted RBP22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 PTGR2Q8N8N7 351 aaPredicted RBP22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 STAG3L4Q8TBR4 150 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 ASB9Q96DX5 294 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 C19orf60Q96EN9 201 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 FAM192AQ9GZU8 254 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 CCDC68Q9H2F9 335 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 CACNA2D2Q9NY47 1150 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 TAS2R13Q9NYV9 303 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 ADA2Q9NZK5 511 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 SUCOQ9UBS9 1254 aaKnown RBP22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 VPS9D1Q9Y2B5 631 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 CHD5Q8TDI0 1954 aa22.23■■□□□ 1.15
NKX2-1-201ENST00000354822 H3BNC9 293 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 FKTNO75072 461 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 PIM1P11309 404 aaPredicted RBP22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 ZNF140P52738 457 aaPredicted RBP22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 STX1BP61266 288 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 MRPS22P82650 360 aaKnown RBP22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 UGT3A2Q3SY77 523 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 HECTD3Q5T447 861 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 HACD2Q6Y1H2 254 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 RMDN1Q96DB5 314 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 ZNF512Q96ME7 567 aaPredicted RBP22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 TRAPPC9Q96Q05 1148 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 DERL2Q9GZP9 239 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 CCDC167Q9P0B6 97 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 NT5C1B-RDH14C9J2C7 533 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 PFDN6O15212 129 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 PIRTP0C851 137 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 SCNN1BP51168 640 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 ATP6V0D1P61421 351 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 PPP1R3AQ16821 1122 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 REP15Q6BDI9 236 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 CLEC6AQ6EIG7 209 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 SLC8B1Q6J4K2 584 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 CHST9Q7L1S5 443 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 MFN1Q8IWA4 741 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 ADCY4Q8NFM4 1077 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 HMGCLL1Q8TB92 370 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 SH3RF2Q8TEC5 729 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 KIAA1191Q96A73 305 aa22.22■■□□□ 1.15
NKX2-1-201ENST00000354822 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 CCDC189A1A4V9 331 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 STX16-NPEPL1H3BU86 382 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 CR2P20023 1033 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 TRAP1Q12931 704 aaKnown RBP22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 ZNF177Q13360 481 aaPredicted RBP22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 ADGRE1Q14246 886 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 TRIM25Q14258 630 aaKnown RBP22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 TAS1R1Q7RTX1 841 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 GLT6D1Q7Z4J2 308 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 RIN3Q8TB24 985 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 ATOH8Q96SQ7 321 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 Q9H521 79 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 SCUBE2Q9NQ36 999 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 LCHNA4D1U4 455 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 ZNF840PA6NDX5 716 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 NRP2O60462 931 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 RNASEH1O60930 286 aaKnown RBP22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 KERAO60938 352 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 NDUFS3O75489 264 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 RHOBTB1O94844 696 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 RHOCP08134 193 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 SH3BP2P78314 561 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 IRX1P78414 480 aaPredicted RBP22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 OR4D1Q15615 310 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 PRSS55Q6UWB4 352 aaPredicted RBP22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 DENND1CQ8IV53 801 aa22.21■■□□□ 1.15
NKX2-1-201ENST00000354822 SPNS2Q8IVW8 549 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms