RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 UBXN8O00124 270 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 GIPC1O14908 333 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 TREHO43280 583 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 MMP3P08254 477 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 COL6A2P12110 1019 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 NCF1P14598 390 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 DARSP14868 501 aaKnown RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 ZNF182P17025 639 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 GPX3P22352 226 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 ELK4P28324 431 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 PPP1R8Q12972 351 aaKnown RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 ATP1A4Q13733 1029 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 RAB39AQ14964 217 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 AAK1Q2M2I8 961 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 SAMD4BQ5PRF9 694 aaKnown RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 OTUD3Q5T2D3 398 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 HECTD2Q5U5R9 776 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 PPP4R4Q6NUP7 873 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 C14orf80Q86SX3 495 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 CNTN4Q8IWV2 1026 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 LRRC43Q8N309 656 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 TANKQ92844 425 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 SENP8Q96LD8 212 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 COG8Q96MW5 612 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 NPLQ9BXD5 320 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 TUBB1Q9H4B7 451 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 CXorf21Q9HAI6 301 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 TREX1Q9NSU2 369 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 TSR3Q9UJK0 312 aaKnown RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 CNOT11Q9UKZ1 510 aaKnown RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 HTTP42858 3142 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 BAIAP3O94812 1187 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 PRDX3P30048 256 aaKnown RBP11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 ADSLP30566 484 aaPredicted RBP11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 PIGFQ07326 219 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 MERTKQ12866 999 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 IRF5Q13568 498 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 ARL13BQ3SXY8 428 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 SV2CQ496J9 727 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 UNC50Q53HI1 259 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 TWF2Q6IBS0 349 aaKnown RBP11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 DQX1Q8TE96 717 aaKnown RBP11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 NTAN1Q96AB6 310 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 MAML3Q96JK9 1138 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 C1orf50Q9BV19 199 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 SLC25A23Q9BV35 468 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 MID1IP1Q9NPA3 183 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 CORINQ9Y5Q5 1042 aa11.96□□□□□ -0.5
CCDC144CP-201ENST00000340196 ARPC2O15144 300 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 CD4P01730 458 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 PCNAP12004 261 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 IDO1P14902 403 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 ZNF157P51786 506 aaPredicted RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 WNT3AP56704 352 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SCAPQ12770 1279 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SNX17Q15036 470 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 CYP51A1Q16850 503 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 PFKFB4Q16877 469 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 ANKRD34AQ69YU3 496 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 GRAMD4Q6IC98 578 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SNX29P2Q8IUI4 249 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 OR6J1Q8NGC5 347 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 OR13J1Q8NGT2 312 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 TRPC4APQ8TEL6 797 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 HDAC10Q969S8 669 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 OSBPL6Q9BZF3 934 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 FAM117AQ9C073 453 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 UPF3AQ9H1J1 476 aaKnown RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 RPF2Q9H7B2 306 aaKnown RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 TMLHEQ9NVH6 421 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 MIOSQ9NXC5 875 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SARDHQ9UL12 918 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 PADI4Q9UM07 663 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 DERAQ9Y315 318 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 HHLA1C9JL84 531 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 J3KR12 359 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 NCAM2O15394 837 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 DYNC1LI2O43237 492 aaPredicted RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 LTA4HP09960 611 aaKnown RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 CD86P42081 329 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 GNA12Q03113 381 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 UGP2Q16851 508 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 TMEM214Q6NUQ4 689 aaKnown RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 RGMBQ6NW40 437 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 C8orf82Q6P1X6 216 aaPredicted RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 DPP9Q86TI2 863 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 ISCA2Q86U28 154 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 PTGR2Q8N8N7 351 aaPredicted RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 RSPH1Q8WYR4 309 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 KCTD13Q8WZ19 329 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 PABPC5Q96DU9 382 aaKnown RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SMIM14Q96QK8 99 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 NT5MQ9NPB1 228 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SEMA4BQ9NPR2 832 aaPredicted RBP11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SLC38A7Q9NVC3 462 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 SLC8A2Q9UPR5 921 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 DOCK3Q8IZD9 2030 aa11.95□□□□□ -0.5
CCDC144CP-201ENST00000340196 ZSWIM8A7E2V4 1837 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms