RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SH3RF2Q8TEC5 729 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 SUSD3Q96L08 255 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 GPR22Q99680 433 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 MATN3O15232 486 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 MT-CO1P00395 513 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 S100BP04271 92 aaPredicted RBP13.91□□□□□ -0.18
SF1-202ENST00000334944 CYP11A1P05108 521 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 TSPAN8P19075 237 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 PCYT1AP49585 367 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 CSHL1Q14406 222 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 MBTPS1Q14703 1052 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 ARTNQ5T4W7 220 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 GALNT18Q6P9A2 607 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 ADCY4Q8NFM4 1077 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 PSMG2Q969U7 264 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 MYEOVQ96EZ4 313 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 C1QTNF1Q9BXJ1 281 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 SMOC2Q9H3U7 446 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 RHOJQ9H4E5 214 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 PCDH12Q9NPG4 1184 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 OXSMQ9NWU1 459 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 ADAM28Q9UKQ2 775 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 AAR2Q9Y312 384 aaKnown RBP13.91□□□□□ -0.18
SF1-202ENST00000334944 RAD54BQ9Y620 910 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 TLL2Q9Y6L7 1015 aa13.91□□□□□ -0.18
SF1-202ENST00000334944 H3BMQ9 156 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 MPOP05164 745 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 ZNF26P17031 533 aaPredicted RBP13.9□□□□□ -0.18
SF1-202ENST00000334944 KLF10Q13118 480 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 RGS21Q2M5E4 152 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 MTX3Q5HYI7 312 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 RAP1GAP2Q684P5 730 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 NEPROQ6NW34 567 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 LYSMD3Q7Z3D4 306 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 ALDH16A1Q8IZ83 802 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 PPHLN1Q8NEY8 458 aaKnown RBP13.9□□□□□ -0.18
SF1-202ENST00000334944 TMA16Q96EY4 203 aaKnown RBP13.9□□□□□ -0.18
SF1-202ENST00000334944 COG8Q96MW5 612 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 RPF2Q9H7B2 306 aaKnown RBP13.9□□□□□ -0.18
SF1-202ENST00000334944 CATSPERBQ9H7T0 1116 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 CXorf21Q9HAI6 301 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 DAPK2Q9UIK4 370 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 SNX13Q9Y5W8 968 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 ZNF236Q9UL36 1845 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 MAGEB16A2A368 324 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 DLX3O60479 287 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 KPNA6O60684 536 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 ZNF12P17014 697 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 PRDX6P30041 224 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 DPP6P42658 865 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 ARCN1P48444 511 aaKnown RBP13.9□□□□□ -0.18
SF1-202ENST00000334944 ACADVLP49748 655 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 ESRRGP62508 458 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 NEDD8Q15843 81 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 NIPAL1Q6NVV3 410 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 GLB1LQ6UWU2 654 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 PRR23BQ6ZRT6 265 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 ZC3H7AQ8IWR0 971 aaKnown RBP13.9□□□□□ -0.18
SF1-202ENST00000334944 FAM110BQ8TC76 370 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 TSNARE1Q96NA8 513 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 FCRL5Q96RD9 977 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 IL12RB2Q99665 862 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 PCDHAC1Q9H158 963 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 TCF7L2Q9NQB0 619 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 GIN1Q9NXP7 522 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 TUBA8Q9NY65 449 aaPredicted RBP13.9□□□□□ -0.18
SF1-202ENST00000334944 UTP6Q9NYH9 597 aaKnown RBP13.9□□□□□ -0.18
SF1-202ENST00000334944 STK39Q9UEW8 545 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 ACOT9Q9Y305 439 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 MYLKQ15746 1914 aa13.9□□□□□ -0.18
SF1-202ENST00000334944 SCAMP3O14828 347 aaKnown RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 ANXA9O76027 345 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 YAP1P46937 504 aaKnown RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 FCGRTP55899 365 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 PMS2P3Q13401 168 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 EIF4EBP2Q13542 120 aaPredicted RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 PGS1Q32NB8 556 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 EPGNQ6UW88 154 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 RNF19BQ6ZMZ0 732 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 LINC00523Q86TU6 105 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 CFAP52Q8N1V2 620 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 OR6P1Q8NGX9 317 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 IGSF8Q969P0 613 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 RCN3Q96D15 328 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 MCMBPQ9BTE3 642 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 RNF186Q9NXI6 227 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 CDY1Q9Y6F8 540 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 SLC4A1P02730 911 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 SPIDRQ14159 915 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 MANEALQ5VSG8 457 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 CYP2R1Q6VVX0 501 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 DSELQ8IZU8 1212 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 CADM3Q8N126 398 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 NAT16Q8N8M0 369 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 RTL3Q8N8U3 475 aaKnown RBP13.89□□□□□ -0.19
SF1-202ENST00000334944 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 ISL2Q96A47 359 aa13.89□□□□□ -0.19
SF1-202ENST00000334944 SEPT5Q99719 369 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms