RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 BRSK1Q8TDC3 778 aa18.92■□□□□ 0.62
RFTN1-201ENST00000334133 PRICKLE1Q96MT3 831 aaPredicted RBP18.92■□□□□ 0.62
RFTN1-201ENST00000334133 FGF1P05230 155 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 ZNF37AP17032 561 aaPredicted RBP18.91■□□□□ 0.62
RFTN1-201ENST00000334133 VCLP18206 1134 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 DDIASQ8IXT1 998 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 FBXO22Q8NEZ5 403 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 CCDC126Q96EE4 140 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 LRCH3Q96II8 777 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 FEM1CQ96JP0 617 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 TRIM8Q9BZR9 551 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 MEAF6Q9HAF1 191 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 DTNAQ9Y4J8 743 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 PCDHGA7Q9Y5G6 932 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 OR1I1O60431 355 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 RHOBTB1O94844 696 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 SELPP16109 830 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 HLA-DPA1P20036 260 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 FDXRP22570 491 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 SOX11P35716 441 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 CCL23P55773 120 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 YBEYP58557 167 aaPredicted RBP18.91■□□□□ 0.62
RFTN1-201ENST00000334133 MED21Q13503 144 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 SLC14A2Q15849 920 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 SETD3Q86TU7 594 aaPredicted RBP18.91■□□□□ 0.62
RFTN1-201ENST00000334133 TTPALQ9BTX7 342 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.91■□□□□ 0.62
RFTN1-201ENST00000334133 SEMA6AQ9H2E6 1030 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 SEMA4BQ9NPR2 832 aaPredicted RBP18.91■□□□□ 0.62
RFTN1-201ENST00000334133 PSMD13Q9UNM6 376 aa18.91■□□□□ 0.62
RFTN1-201ENST00000334133 ALDOCP09972 364 aaKnown RBP18.9■□□□□ 0.62
RFTN1-201ENST00000334133 KIF19Q2TAC6 998 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 LHX8Q68G74 356 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 REP15Q6BDI9 236 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 SCIMPQ6UWF3 145 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 GLT6D1Q7Z4J2 308 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 ATP6V1E2Q96A05 226 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 LRGUKQ96M69 825 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 SLC30A3Q99726 388 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 PKP2Q99959 881 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 UBA2Q9UBT2 640 aaPredicted RBP18.9■□□□□ 0.62
RFTN1-201ENST00000334133 DNMT3LQ9UJW3 386 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 DNAJC15Q9Y5T4 150 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 SUPT3HB4E1H0 165 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 COCHO43405 550 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 SNAP91O60641 907 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 SUPT3HO75486 399 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 CDK14O94921 469 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 CSPG5O95196 566 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 WISP3O95389 354 aaPredicted RBP18.9■□□□□ 0.62
RFTN1-201ENST00000334133 INHAP05111 366 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 OXCT1P55809 520 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 SLC22A9Q8IVM8 553 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 C19orf60Q96EN9 201 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 AKTIPQ9H8T0 292 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 SARS2Q9NP81 518 aaKnown RBP18.9■□□□□ 0.62
RFTN1-201ENST00000334133 CACNA2D2Q9NY47 1150 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 TIMM22Q9Y584 194 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 CDC7O00311 574 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 NDST3O95803 873 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 LINC00032P0C843 101 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 MTHFD2P13995 350 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 UQCRBP14927 111 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 MAPKAPK2P49137 400 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 HERVK_113P63132 956 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 FOLH1Q04609 750 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 GK3PQ14409 553 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 GRB7Q14451 532 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 TSNQ15631 228 aaKnown RBP18.9■□□□□ 0.62
RFTN1-201ENST00000334133 TMCO2Q7Z6W1 182 aaPredicted RBP18.9■□□□□ 0.62
RFTN1-201ENST00000334133 DEFB128Q7Z7B8 93 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 ICA1LQ8NDH6 482 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 DCUN1D1Q96GG9 259 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 ERVK-6Q9BXR3 956 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 RNF38Q9H0F5 515 aa18.9■□□□□ 0.62
RFTN1-201ENST00000334133 SRP72O76094 671 aaKnown RBP18.89■□□□□ 0.61
RFTN1-201ENST00000334133 CORO1AP31146 461 aaKnown RBP18.89■□□□□ 0.61
RFTN1-201ENST00000334133 STC1P52823 247 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 RING1Q06587 406 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 PIANPQ8IYJ0 282 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 AFAP1L2Q8N4X5 818 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 UTP6Q9NYH9 597 aaKnown RBP18.89■□□□□ 0.61
RFTN1-201ENST00000334133 C2orf78A6NCI8 922 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 MOXD2PA6NHM9 499 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 PIP5K1BO14986 540 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 AGTR2P50052 363 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 YBX1P67809 324 aaKnown RBP18.89■□□□□ 0.61
RFTN1-201ENST00000334133 CHSY3Q70JA7 882 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 TRIB3Q96RU7 358 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 GPR21Q99679 349 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 MUC3BQ9H195 1237 aa18.89■□□□□ 0.61
RFTN1-201ENST00000334133 PRORSD1PA6NEY8 169 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 GOLGA8CPA6NN73 597 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 IQCF5A8MTL0 148 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 ARVCFO00192 962 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 PQBP1O60828 265 aaKnown RBP18.88■□□□□ 0.61
RFTN1-201ENST00000334133 SEC24AO95486 1093 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 ZDHHC11BP0C7U3 371 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 HERC3Q15034 1050 aa18.88■□□□□ 0.61
RFTN1-201ENST00000334133 IL23RQ5VWK5 629 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms