RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 AARSD1Q9BTE6 412 aaKnown RBP17.39■□□□□ 0.37
DDX28-201ENST00000332395 GSTO2Q9H4Y5 243 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 POPDC3Q9HBV1 291 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 INTS10Q9NVR2 710 aaKnown RBP17.39■□□□□ 0.37
DDX28-201ENST00000332395 SMPD4Q9NXE4 827 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 PPM1HQ9ULR3 514 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 POMPQ9Y244 141 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 COPG1Q9Y678 874 aaKnown RBP17.39■□□□□ 0.37
DDX28-201ENST00000332395 PENKP01210 267 aaPredicted RBP17.39■□□□□ 0.37
DDX28-201ENST00000332395 CES1P23141 567 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 MTTPP55157 894 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 ARF5P84085 180 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 NFKB2Q00653 900 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 HERC3Q15034 1050 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 CWF19L1Q69YN2 538 aaKnown RBP17.39■□□□□ 0.37
DDX28-201ENST00000332395 AAGABQ6PD74 315 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 MFN1Q8IWA4 741 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 EFCAB3Q8N7B9 438 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 L3HYPDHQ96EM0 354 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 TTC1Q99614 292 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 POLR3BQ9NW08 1133 aaPredicted RBP17.39■□□□□ 0.37
DDX28-201ENST00000332395 RAI2Q9Y5P3 530 aa17.39■□□□□ 0.37
DDX28-201ENST00000332395 SMIM24O75264 130 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 C1RP00736 705 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 F11P03951 625 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 TLE2Q04725 743 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 PDAP1Q13442 181 aaKnown RBP17.38■□□□□ 0.37
DDX28-201ENST00000332395 CCNIQ14094 377 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 TCHHL1Q5QJ38 904 aaPredicted RBP17.38■□□□□ 0.37
DDX28-201ENST00000332395 ZNF678Q5SXM1 525 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 AFTPHQ6ULP2 937 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 SLC39A5Q6ZMH5 540 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 EGFL6Q8IUX8 553 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 RYBPQ8N488 228 aaPredicted RBP17.38■□□□□ 0.37
DDX28-201ENST00000332395 KYQ8NBH2 561 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 LPCAT1Q8NF37 534 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 FAM136AQ96C01 138 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 SMIM14Q96QK8 99 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 DDX50Q9BQ39 737 aaKnown RBP17.38■□□□□ 0.37
DDX28-201ENST00000332395 TRMOQ9BU70 441 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 MEAF6Q9HAF1 191 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 NDE1Q9NXR1 346 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 PCDHGC4Q9Y5F7 938 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 ANAPC1Q9H1A4 1944 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 UBA6A0AVT1 1052 aaPredicted RBP17.38■□□□□ 0.37
DDX28-201ENST00000332395 C2orf81A6NN90 581 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 SUPT7LO94864 414 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 APLP1P51693 650 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 C1QTNF8P60827 252 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 TWF1Q12792 350 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 TMEM154Q6P9G4 183 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 C16orf89Q6UX73 402 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 LINGO4Q6UY18 593 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 HERC6Q8IVU3 1022 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 DSELQ8IZU8 1212 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 PELI3Q8N2H9 469 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 JADE3Q92613 823 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 EXT2Q93063 718 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 RNF208Q9H0X6 261 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 S100A14Q9HCY8 104 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 PAPOLBQ9NRJ5 636 aaKnown RBP17.38■□□□□ 0.37
DDX28-201ENST00000332395 ETAA1Q9NY74 926 aa17.38■□□□□ 0.37
DDX28-201ENST00000332395 ANKRD36A6QL64 1941 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 UBFD1O14562 309 aaKnown RBP17.37■□□□□ 0.37
DDX28-201ENST00000332395 PRRG1O14668 218 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 SCAMP3O14828 347 aaKnown RBP17.37■□□□□ 0.37
DDX28-201ENST00000332395 MAP3K7O43318 606 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 SNAP91O60641 907 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 TMCC1O94876 653 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 BAG2O95816 211 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 CD160O95971 181 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 MBL2P11226 248 aaPredicted RBP17.37■□□□□ 0.37
DDX28-201ENST00000332395 PPP3CCP48454 512 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 HERVK_113P63132 956 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 TRIM60Q495X7 471 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 IRGCQ6NXR0 463 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 CNKSR3Q6P9H4 555 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 DNAJB7Q7Z6W7 309 aaPredicted RBP17.37■□□□□ 0.37
DDX28-201ENST00000332395 SLC39A11Q8N1S5 342 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 PYDC1Q8WXC3 89 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 RCN3Q96D15 328 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 ZFRQ96KR1 1074 aaKnown RBP17.37■□□□□ 0.37
DDX28-201ENST00000332395 ZNF558Q96NG5 402 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 ZBED2Q9BTP6 218 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 ERVK-6Q9BXR3 956 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 STOML2Q9UJZ1 356 aa17.37■□□□□ 0.37
DDX28-201ENST00000332395 PRPF19Q9UMS4 504 aaKnown RBP17.37■□□□□ 0.37
DDX28-201ENST00000332395 PSMA3P25788 255 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 ROR2Q01974 943 aaKnown RBP17.36■□□□□ 0.37
DDX28-201ENST00000332395 OR4D1Q15615 310 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 TMEM150AQ86TG1 271 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 SLC26A7Q8TE54 656 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 LPGAT1Q92604 370 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 TRAF6Q9Y4K3 522 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 ANKRD66B4E2M5 251 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 H3BMM5 538 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 MAP3K13O43283 966 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 TBL1XO60907 577 aa17.36■□□□□ 0.37
DDX28-201ENST00000332395 RHOBTB1O94844 696 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms