RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 HDHD2Q9H0R4 259 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TUBA8Q9NY65 449 aaPredicted RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 STMN3Q9NZ72 180 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 IKZF3Q9UKT9 509 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 SYNPO2Q9UMS6 1093 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 PMF1-BGLAPU3KQ54 211 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 UBXN8O00124 270 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 HTRA2O43464 458 aaPredicted RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 BCAS2O75934 225 aaPredicted RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 ALOX5P09917 674 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 PTPRAP18433 802 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 ADCYAP1R1P41586 468 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 PRKCQQ04759 706 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 C1DQ13901 141 aaKnown RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 OVOS1Q6IE37 1185 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 FAM45AQ8TCE6 357 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 SELENOMQ8WWX9 145 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 SMARCD1Q96GM5 515 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TRMOQ9BU70 441 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 RHOBTB2Q9BYZ6 727 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 MROH8Q9H579 483 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 OPTCQ9UBM4 332 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 OGDHLQ9ULD0 1010 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 CNTN6Q9UQ52 1028 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TBC1D30Q9Y2I9 924 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 NFASCO94856 1347 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TMCC2O75069 709 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 ICAM3P32942 547 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 INO80DQ53TQ3 878 aaPredicted RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 ZCCHC8Q6NZY4 707 aaKnown RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 CDH24Q86UP0 819 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TSSK3Q96PN8 268 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 HIPK3Q9H422 1215 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 KCNK13Q9HB14 408 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 MSI1O43347 362 aaKnown RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 FARP2O94887 1054 aaPredicted RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 RRM2P31350 389 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 CHI3L1P36222 383 aaPredicted RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 GGT5P36269 586 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 TRIM32Q13049 653 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 TCEAL1Q15170 157 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 SYT16Q17RD7 645 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 NCCRP1Q6ZVX7 275 aaPredicted RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 PLEKHM3Q6ZWE6 761 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 MCOLN3Q8TDD5 553 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 RAB2BQ8WUD1 216 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 ISOC1Q96CN7 298 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 OR52E6Q96RD3 313 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 SOWAHAQ2M3V2 549 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 SDHAF4Q5VUM1 108 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 GLB1LQ6UWU2 654 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 P2RY8Q86VZ1 359 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 DCP1BQ8IZD4 617 aaKnown RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 FCRL2Q96LA5 508 aaPredicted RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 SYT11Q9BT88 431 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 ADGRE3Q9BY15 652 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 EBF1Q9UH73 591 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 MYH1P12882 1939 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 LOC110117498-PIK3R3F6TDL0 507 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 RGS14O43566 566 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 ULK1O75385 1050 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 LRIG2O94898 1065 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 PGLSO95336 258 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 STAU1O95793 577 aaKnown RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 COL6A2P12110 1019 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 POLR2JP52435 117 aaKnown RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 BOP1Q14137 746 aaKnown RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 CHSY3Q70JA7 882 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 GPRC5AQ8NFJ5 357 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 SLC47A1Q96FL8 570 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 PAWRQ96IZ0 340 aaKnown RBP14.03□□□□□ -0.16
EPHB3-201ENST00000330394 GLT1D1Q96MS3 346 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 MRIQ9BWK5 157 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 COLEC11Q9BWP8 271 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 TLE6Q9H808 572 aa14.03□□□□□ -0.16
EPHB3-201ENST00000330394 GRIN3BO60391 1043 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 GPIP06744 558 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 HOXC6P09630 235 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 LMO2P25791 158 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 TAB1Q15750 504 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 ZNF829Q3KNS6 432 aaPredicted RBP14.02□□□□□ -0.16
EPHB3-201ENST00000330394 MARVELD2Q8N4S9 558 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 CAMKK1Q8N5S9 505 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 OR10A6Q8NH74 314 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 FNDC8Q8TC99 324 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 PNPT1Q8TCS8 783 aaKnown RBP14.02□□□□□ -0.16
EPHB3-201ENST00000330394 ZBTB26Q9HCK0 441 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 HEMK1Q9Y5R4 338 aaPredicted RBP14.02□□□□□ -0.16
EPHB3-201ENST00000330394 BBIP1A8MTZ0 92 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 E7ESA3 106 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 BCKDKO14874 412 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 IL7RP16871 459 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 ITGALP20701 1170 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 GCAP28676 217 aa14.02□□□□□ -0.16
EPHB3-201ENST00000330394 CCT3P49368 545 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms