RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TMEM259Q4ZIN3 620 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3GQ6DHY5 549 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3CQ6IPX1 549 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TTC23LQ6PF05 361 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 LIPIQ6XZB0 460 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 MACC1Q6ZN28 852 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ARHGAP36Q6ZRI8 547 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ADAT2Q7Z6V5 191 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3Q8IZP1 549 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 PGBD5Q8N414 524 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TTC30BQ8N4P2 665 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 MREGQ8N565 214 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 PDCD7Q8N8D1 485 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 OR52K2Q8NGK3 314 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 PDCD6IPQ8WUM4 868 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ZFPM2Q8WW38 1151 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CAVIN3Q969G5 261 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 VPS39Q96JC1 886 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 NUSAP1Q9BXS6 441 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SLC17A9Q9BYT1 436 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 EPC1Q9H2F5 836 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CD248Q9HCU0 757 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SENP1Q9P0U3 644 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CRLS1Q9UJA2 301 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 GNPTGQ9UJJ9 305 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 GLYATL1P3A0A0U1RQE8 302 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 A0A1W2PPC4 97 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SCAMP3O14828 347 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ATP8B1O43520 1251 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 BNIP3LO60238 219 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF821O75541 412 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 MMP2P08253 660 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 OR56A5P0C7T3 313 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ATXN1LP0C7T5 689 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SP9P0CG40 484 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CBSLP0DN79 551 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 GLDCP23378 1020 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CBSP35520 551 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 PTGER3P43115 390 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 THOP1P52888 689 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 GUCY2DQ02846 1103 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 FZD5Q13467 585 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SEPT6Q14141 434 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ANGPT1Q15389 498 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 PMS2CLQ68D20 193 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ANO7Q6IWH7 933 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TTC27Q6P3X3 843 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CYB5D1Q6P9G0 228 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SYT12Q8IV01 421 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SREK1Q8WXA9 508 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SH3KBP1Q96B97 665 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 WDR92Q96MX6 357 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SERPINB12Q96P63 405 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 RUFY1Q96T51 708 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CYTH2Q99418 400 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TIMM29Q9BSF4 260 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ZDHHC3Q9NYG2 299 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ZC3H7BQ9UGR2 993 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SLC24A2Q9UI40 661 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 GPR34Q9UPC5 381 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CHKBQ9Y259 395 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 A0A1W2PP55 124 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 MROH6A6NGR9 719 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 GOLGA6L10A6NI86 522 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 VILLO15195 856 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 MT-CO1P00395 513 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 RETP07949 1114 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 MYCLP1P12525 358 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 HLA-EP13747 358 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ENO3P13929 434 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 MSH3P20585 1137 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 PMLP29590 882 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SKIV2L2P42285 1042 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 GPR1P46091 355 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 RPIAP49247 311 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF140P52738 457 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 RPL6Q02878 288 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CASC4Q6P4E1 433 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 LRIG3Q6UXM1 1119 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CAMK1DQ8IU85 385 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CHST14Q8NCH0 376 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 MAGEC3Q8TD91 643 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 HNRNPLLQ8WVV9 542 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ANKRD7Q92527 254 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 AP2M1Q96CW1 435 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 KLHDC7BQ96G42 594 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 OXNAD1Q96HP4 312 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CPNE1Q99829 537 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 WDR26Q9H7D7 661 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 EPB41L5Q9HCM4 733 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CATSPERZQ9NTU4 200 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 IL17CQ9P0M4 197 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SPASTQ9UBP0 616 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 RAB21Q9UL25 225 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 A0A1W2PQU0 124 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 TCRBV7S2A1N4TA0A589 114 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 PROB1E7EW31 1015 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 NDUFS3O75489 264 aa5.15□□□□□ -1.58
LRIT3-201ENST00000327908 KRT38O76015 456 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms