RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PCDHGA2Q9Y5H1 932 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 ZNF292O60281 2723 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 ANKRD36A6QL64 1941 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 SPTBN4Q9H254 2564 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 OTOGLQ3ZCN5 2332 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 CKAP5Q14008 2032 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 SYNCRIPO60506 623 aaKnown RBP18.04■□□□□ 0.48
SYNE4-201ENST00000324444 C1QAP02745 245 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 EPHX1P07099 455 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 ERVK-10P10266 1014 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 OAS2P29728 719 aaKnown RBP18.04■□□□□ 0.48
SYNE4-201ENST00000324444 SLC8A1P32418 973 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 PPARGP37231 505 aaPredicted RBP18.04■□□□□ 0.48
SYNE4-201ENST00000324444 ARCN1P48444 511 aaKnown RBP18.04■□□□□ 0.48
SYNE4-201ENST00000324444 POLD2P49005 469 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 CCR3P51677 355 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 GAS6Q14393 721 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 STARD3Q14849 445 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 TMED2Q15363 201 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 HSP90AA5PQ58FG0 334 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 TNFAIP8L3Q5GJ75 292 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 C9orf64Q5T6V5 341 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 TEDDM1Q5T9Z0 273 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 FSTL4Q6MZW2 842 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 NEPROQ6NW34 567 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 AFTPHQ6ULP2 937 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 MAMSTRQ6ZN01 415 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 Q6ZS52 159 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 GALNT7Q86SF2 657 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 SYNPOQ8N3V7 929 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 OR6P1Q8NGX9 317 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 DCAKDQ8WVC6 231 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 ALKBH8Q96BT7 664 aaKnown RBP18.04■□□□□ 0.48
SYNE4-201ENST00000324444 TLCD1Q96CP7 247 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 MCCC1Q96RQ3 725 aaPredicted RBP18.04■□□□□ 0.48
SYNE4-201ENST00000324444 TTC1Q99614 292 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 EURLQ9NYK6 297 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 APPL1Q9UKG1 709 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 STON1Q9Y6Q2 735 aa18.04■□□□□ 0.48
SYNE4-201ENST00000324444 UPK3BL1B0FP48 263 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 UPK3BL2E5RIL1 263 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 H7C0S8 307 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 K7EQS6 105 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 ITGB7P26010 798 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 GCAP28676 217 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 NTSR1P30989 418 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 HNF1BP35680 557 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 IL12RB1P42701 662 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 KIR2DL1P43626 348 aaPredicted RBP18.03■□□□□ 0.48
SYNE4-201ENST00000324444 ZNF140P52738 457 aaPredicted RBP18.03■□□□□ 0.48
SYNE4-201ENST00000324444 SATB1Q01826 763 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 SFSWAPQ12872 951 aaKnown RBP18.03■□□□□ 0.48
SYNE4-201ENST00000324444 ARHGEF7Q14155 803 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 AARS2Q5JTZ9 985 aaKnown RBP18.03■□□□□ 0.48
SYNE4-201ENST00000324444 EGFLAMQ63HQ2 1017 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 CBARPQ8N350 705 aaPredicted RBP18.03■□□□□ 0.48
SYNE4-201ENST00000324444 ZBTB44Q8NCP5 570 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 MDGA1Q8NFP4 955 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 GPR150Q8NGU9 434 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 GRIN3AQ8TCU5 1115 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 NELL1Q92832 810 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.03■□□□□ 0.485e-7■■■■□ 23.5
SYNE4-201ENST00000324444 RAB7BQ96AH8 199 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 VOPP1Q96AW1 172 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 ARL8AQ96BM9 186 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 ZNF778Q96MU6 729 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 TCF12Q99081 682 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 CDH19Q9H159 772 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 IARS2Q9NSE4 1012 aaKnown RBP18.03■□□□□ 0.48
SYNE4-201ENST00000324444 TBK1Q9UHD2 729 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 PPM1HQ9ULR3 514 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 SPO11Q9Y5K1 396 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 ARL5AQ9Y689 179 aa18.03■□□□□ 0.48
SYNE4-201ENST00000324444 C1orf232A0A0U1RR37 186 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 ANTXRLA6NF34 631 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 A6NNZ2 444 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 TDGF1P13385 188 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 OGNP20774 298 aaKnown RBP18.02■□□□□ 0.47
SYNE4-201ENST00000324444 GKP32189 559 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 CXCL12P48061 93 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 ELP6Q0PNE2 266 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 CCINQ13939 588 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 TUBB8Q3ZCM7 444 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 TTMPQ5BVD1 217 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 PACS1Q6VY07 963 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 TTC7BQ86TV6 843 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 STK40Q8N2I9 435 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 SPEM1Q8N4L4 309 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 TTC30BQ8N4P2 665 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 SUMF1Q8NBK3 374 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 OR4K2Q8NGD2 314 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 OR13J1Q8NGT2 312 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 OR4L1Q8NH43 312 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 FAM76AQ8TAV0 307 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 HDAC10Q969S8 669 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 MRRFQ96E11 262 aaKnown RBP18.02■□□□□ 0.47
SYNE4-201ENST00000324444 CDKN2AIPNLQ96HQ2 116 aa18.02■□□□□ 0.47
SYNE4-201ENST00000324444 TRIM56Q9BRZ2 755 aaKnown RBP18.02■□□□□ 0.47
SYNE4-201ENST00000324444 FAM126AQ9BYI3 521 aaPredicted RBP18.02■□□□□ 0.47
SYNE4-201ENST00000324444 CNOT10Q9H9A5 744 aaKnown RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms