RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TCF12Q99081 682 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 DDX50Q9BQ39 737 aaKnown RBP22.33■■□□□ 1.17
PNKP-201ENST00000322344 CCDC167Q9P0B6 97 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 LRFN2Q9ULH4 789 aa22.33■■□□□ 1.17
PNKP-201ENST00000322344 A0A0D9SEW6 157 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 A0A1W2PQ45 241 aaPredicted RBP22.33■■□□□ 1.16
PNKP-201ENST00000322344 A0A1W2PQY0 241 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 FBP2O00757 339 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 HOXA2O43364 376 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 DENRO43583 198 aaKnown RBP22.33■■□□□ 1.16
PNKP-201ENST00000322344 KDELR3O43731 214 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 PSMA3P25788 255 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 SLC6A4P31645 630 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 ZNF140P52738 457 aaPredicted RBP22.33■■□□□ 1.16
PNKP-201ENST00000322344 OXCT1P55809 520 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 FOLH1Q04609 750 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 TRAP1Q12931 704 aaKnown RBP22.33■■□□□ 1.16
PNKP-201ENST00000322344 PDK3Q15120 406 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 UGT3A2Q3SY77 523 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 CLEC6AQ6EIG7 209 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 RYBPQ8N488 228 aaPredicted RBP22.33■■□□□ 1.16
PNKP-201ENST00000322344 OVCA2Q8WZ82 227 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 SRRDQ9UH36 339 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 RAB26Q9ULW5 256 aa22.33■■□□□ 1.16
PNKP-201ENST00000322344 CCDC189A1A4V9 331 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 CAPNS1P04632 268 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 NAA20P61599 178 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 TAF1AQ15573 450 aaPredicted RBP22.32■■□□□ 1.16
PNKP-201ENST00000322344 SPATA24Q86W54 205 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 MFN1Q8IWA4 741 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 PCDH20Q8N6Y1 951 aaKnown RBP22.32■■□□□ 1.16
PNKP-201ENST00000322344 OR7D4Q8NG98 312 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 SH3RF2Q8TEC5 729 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 ATOH8Q96SQ7 321 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 TTPALQ9BTX7 342 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 MRPL9Q9BYD2 267 aaKnown RBP22.32■■□□□ 1.16
PNKP-201ENST00000322344 DERL2Q9GZP9 239 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 SPAG4Q9NPE6 437 aa22.32■■□□□ 1.16
PNKP-201ENST00000322344 ZFP37Q9Y6Q3 630 aaPredicted RBP22.32■■□□□ 1.16
PNKP-201ENST00000322344 CAPN8A6NHC0 703 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 BBIP1A8MTZ0 92 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 E7ENX8 843 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 MRASO14807 208 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 TRIM24O15164 1050 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 AP1G1O43747 822 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 AHCYL1O43865 530 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 NRP2O60462 931 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 CLDN11O75508 207 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 FESP07332 822 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 ATF6P18850 670 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 HOXD10P28358 340 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 MSX2P35548 267 aaPredicted RBP22.31■■□□□ 1.16
PNKP-201ENST00000322344 HSPA13P48723 471 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 CLCN2P51788 898 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 ATP6V0D1P61421 351 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 IRX1P78414 480 aaPredicted RBP22.31■■□□□ 1.16
PNKP-201ENST00000322344 OR4D1Q15615 310 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 CYHR1Q6ZMK1 362 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 TICAM1Q8IUC6 712 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 MARVELD2Q8N4S9 558 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 PHC3Q8NDX5 983 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 STAG3L4Q8TBR4 150 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 EXT2Q93063 718 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 KIAA1191Q96A73 305 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 HHIPL1Q96JK4 782 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 CCDC68Q9H2F9 335 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 COPS7BQ9H9Q2 264 aaPredicted RBP22.31■■□□□ 1.16
PNKP-201ENST00000322344 TAS2R13Q9NYV9 303 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 VPS9D1Q9Y2B5 631 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 GREB1Q4ZG55 1949 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 ARVCFO00192 962 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 TXNDC9O14530 226 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 INSIG1O15503 277 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 KERAO60938 352 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 SRP72O76094 671 aaKnown RBP22.31■■□□□ 1.16
PNKP-201ENST00000322344 RHOBTB1O94844 696 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 CDK14O94921 469 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 PIRTP0C851 137 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 KLHDC10Q6PID8 442 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 ROPN1LQ96C74 230 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 NACA2Q9H009 215 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 CROTQ9UKG9 612 aa22.31■■□□□ 1.16
PNKP-201ENST00000322344 ILVBLA1L0T0 632 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 H3BNC9 293 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 UBXN8O00124 270 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 AZIN1O14977 448 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 C8BP07358 591 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 MTHFD2P13995 350 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 CHN2P52757 468 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 SH3BP2P78314 561 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 SAMD4BQ5PRF9 694 aaKnown RBP22.3■■□□□ 1.16
PNKP-201ENST00000322344 DBF4BQ8NFT6 615 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 LPGAT1Q92604 370 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 PLD4Q96BZ4 506 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 KLHL32Q96NJ5 620 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 GCNAQ96QF7 691 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 CENPKQ9BS16 269 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 SPON2Q9BUD6 331 aa22.3■■□□□ 1.16
PNKP-201ENST00000322344 MTF2Q9Y483 593 aaPredicted RBP22.3■■□□□ 1.16
PNKP-201ENST00000322344 LCHNA4D1U4 455 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms