RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PNPLA4P41247 253 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 POLD2P49005 469 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 CLCN5P51795 746 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 POLD3Q15054 466 aaPredicted RBP11.15□□□□□ -0.63
PTPN7-201ENST00000309017 GRIK4Q16099 956 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 APOBEC3FQ8IUX4 373 aaKnown RBP11.15□□□□□ -0.63
PTPN7-201ENST00000309017 ADGRG5Q8IZF4 528 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 C2CD4AQ8NCU7 369 aaPredicted RBP11.15□□□□□ -0.63
PTPN7-201ENST00000309017 ACDQ96AP0 544 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 PABPC5Q96DU9 382 aaKnown RBP11.15□□□□□ -0.63
PTPN7-201ENST00000309017 NSMCE2Q96MF7 247 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 TMEM74Q96NL1 305 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 SLC9A7Q96T83 725 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 HNRNPABQ99729 332 aaKnown RBP11.15□□□□□ -0.63
PTPN7-201ENST00000309017 TRMOQ9BU70 441 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 SEMA4BQ9NPR2 832 aaPredicted RBP11.15□□□□□ -0.63
PTPN7-201ENST00000309017 INIPQ9NRY2 104 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 RGS18Q9NS28 235 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 ATAD3AQ9NVI7 634 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 COL4A5P29400 1685 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 LRRC14BA6NHZ5 514 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 PPP6CO00743 305 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 TOR1BO14657 336 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 IMPDH1P20839 514 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 MATN1P21941 496 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 CCT8P50990 548 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 ACAP2Q15057 778 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 TIGD2Q4W5G0 525 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 HACD2Q6Y1H2 254 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 LARP4Q71RC2 724 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 TBC1D21Q8IYX1 336 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 SEZ6LQ9BYH1 1024 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 KLHL25Q9H0H3 589 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 MAP10Q9P2G4 905 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF112Q9UJU3 913 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 CDH7Q9ULB5 785 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 RBMX2Q9Y388 322 aaKnown RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 CORINQ9Y5Q5 1042 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 SIP14410 1827 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 TMEM247A6NEH6 219 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 NCF1BA6NI72 391 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 C16orf96A6NNT2 1141 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 NCF1CA8MVU1 366 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 UBFD1O14562 309 aaKnown RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 F9P00740 461 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 NCF1P14598 390 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 GPX3P22352 226 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 SLC6A2P23975 617 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 IREB2P48200 963 aaKnown RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 OXCT1P55809 520 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 DAOAP59103 153 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 ZNF280AP59817 542 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 IL1RL1Q01638 556 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 INTS6LQ5JSJ4 861 aaKnown RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 NIPAL1Q6NVV3 410 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 DLK2Q6UY11 383 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 CASP10Q92851 521 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 NTAN1Q96AB6 310 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 CHID1Q9BWS9 393 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 GSTO2Q9H4Y5 243 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 WDR6Q9NNW5 1121 aaKnown RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 CACNG4Q9UBN1 327 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 RGS17Q9UGC6 210 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 DERAQ9Y315 318 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 TIMM22Q9Y584 194 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 DNAH12Q6ZR08 3092 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 UBA6A0AVT1 1052 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 I6L893 689 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 SYNCRIPO60506 623 aaKnown RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 DNAJB1P25685 340 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 KPNA1P52294 538 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 MAXP61244 160 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 TNK2Q07912 1038 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 VGLL4Q14135 290 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 MAPK11Q15759 364 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 RALGPS2Q86X27 583 aaPredicted RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 DUS3LQ96G46 650 aaKnown RBP11.14□□□□□ -0.63
PTPN7-201ENST00000309017 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 DNAJC15Q9Y5T4 150 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 ST14Q9Y5Y6 855 aa11.14□□□□□ -0.63
PTPN7-201ENST00000309017 OR51F1A6NGY5 319 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 CCDC154A6NI56 674 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 SYCE1LA8MT33 242 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 UBXN8O00124 270 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 CLPXO76031 633 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 IL7RP16871 459 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ARNTP27540 789 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 RFC2P35250 354 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 ARCN1P48444 511 aaKnown RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 HLCSP50747 726 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 APLP1P51693 650 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 DIO3P55073 304 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 WNT3AP56704 352 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 LSM3P62310 102 aaKnown RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 SPIDRQ14159 915 aa11.13□□□□□ -0.63
PTPN7-201ENST00000309017 KIAA0930Q6ICG6 404 aaPredicted RBP11.13□□□□□ -0.63
PTPN7-201ENST00000309017 LCN8Q6JVE9 175 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms