RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SNAP91O60641 907 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 TRIM16O95361 564 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 BDNFP23560 247 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 SNX16P57768 344 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 TAS2R39P59534 338 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 ARPC4P59998 168 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 TMEM132DQ14C87 1099 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 TMTC4Q5T4D3 741 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 PDZD4Q76G19 769 aaPredicted RBP14.87□□□□□ -0.03
SPIDR-201ENST00000297423 GALNT5Q7Z7M9 940 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 ABI1Q8IZP0 508 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 C8orf59Q8N0T1 100 aaPredicted RBP14.87□□□□□ -0.03
SPIDR-201ENST00000297423 SLCO4A1Q96BD0 722 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 KLQ9UEF7 1012 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 KCNK10P57789 538 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 C1QTNF8P60827 252 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 GTF2H3Q13889 308 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 SPCS2Q15005 226 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 DUSP28Q4G0W2 176 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 CCNYL2Q5T2Q4 361 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 TAPT1Q6NXT6 567 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 ZPBP2Q6X784 338 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 ANKRD52Q8NB46 1076 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 RNF139Q8WU17 664 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 SLC2A11Q9BYW1 496 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 LHX5Q9H2C1 402 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 TRAF6Q9Y4K3 522 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 ORC6Q9Y5N6 252 aa14.87□□□□□ -0.03
SPIDR-201ENST00000297423 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 SNAI1O95863 264 aaPredicted RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 HGFP14210 728 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PRKACGP22612 351 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PTPN9P43378 593 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 ECT2LQ008S8 904 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 TICAM1Q8IUC6 712 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 TXNDC5Q8NBS9 432 aaKnown RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 CHPT1Q8WUD6 406 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 RORBQ92753 470 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 FEM1AQ9BSK4 669 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 ALG2Q9H553 416 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 SMURF2Q9HAU4 748 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PRDM8Q9NQV8 689 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 LOC100506127A0A0U1RQW1 187 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 MYL3P08590 195 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PIM1P11309 404 aaPredicted RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 ACADVLP49748 655 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 TRIM32Q13049 653 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 FAM214AQ32MH5 1076 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 TRAF7Q6Q0C0 670 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 C4orf22Q6V702 233 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PSTKQ8IV42 348 aaKnown RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 TRUB1Q8WWH5 349 aaKnown RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 ITCHQ96J02 903 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 NSMCE2Q96MF7 247 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 BDH2Q9BUT1 245 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 CHID1Q9BWS9 393 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 TOR3AQ9H497 397 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 USP22Q9UPT9 525 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 TIMM22Q9Y584 194 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PARP14Q460N5 1801 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PAPPA2Q9BXP8 1791 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 MAP1BP46821 2468 aaKnown RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 CCRL2O00421 344 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 CCNKO75909 580 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 KPNA2P52292 529 aaKnown RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PITX1P78337 314 aaPredicted RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 NPLOC4Q8TAT6 608 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PPM1MQ96MI6 270 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 IL12RB2Q99665 862 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 THUMPD3Q9BV44 507 aaKnown RBP14.86□□□□□ -0.03
SPIDR-201ENST00000297423 FICDQ9BVA6 458 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 ROGDIQ9GZN7 287 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 PTPRFP10586 1907 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 WDR90Q96KV7 1748 aa14.86□□□□□ -0.03
SPIDR-201ENST00000297423 TFECO14948 347 aaPredicted RBP14.85□□□□□ -0.03
SPIDR-201ENST00000297423 ARPC2O15144 300 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 XPNPEP2O43895 674 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 MT-CYBP00156 380 aaPredicted RBP14.85□□□□□ -0.03
SPIDR-201ENST00000297423 PRKCGP05129 697 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 SMPD1P17405 629 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 ESRP1Q6NXG1 681 aaKnown RBP14.85□□□□□ -0.03
SPIDR-201ENST00000297423 MPZL3Q6UWV2 235 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 QKIQ96PU8 341 aaKnown RBP eCLIP14.85□□□□□ -0.037e-9■■■■■ 36.4
SPIDR-201ENST00000297423 SH3GL1Q99961 368 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 PRMT7Q9NVM4 692 aaPredicted RBP14.85□□□□□ -0.03
SPIDR-201ENST00000297423 NOX1Q9Y5S8 564 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 UBA6A0AVT1 1052 aaPredicted RBP14.85□□□□□ -0.03
SPIDR-201ENST00000297423 CLASP2O75122 1294 aaKnown RBP14.85□□□□□ -0.03
SPIDR-201ENST00000297423 AHSGP02765 367 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 VTNP04004 478 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 IDO1P14902 403 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 CHRNB3Q05901 458 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 SIM2Q14190 667 aaPredicted RBP14.85□□□□□ -0.03
SPIDR-201ENST00000297423 LAPTM4AQ15012 233 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 NCBP2-AS2Q69YL0 99 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 RAB2BQ8WUD1 216 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 FUNDC2Q9BWH2 189 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 TMEM98Q9Y2Y6 226 aa14.85□□□□□ -0.03
SPIDR-201ENST00000297423 CYP3A5P20815 502 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms