RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 SCN2BO60939 215 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 NDUFS2O75306 463 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 PTPN3P26045 913 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 OR1D2P34982 312 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 TRIM40Q6P9F5 258 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 ZPBP2Q6X784 338 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 PAGE2Q7Z2X7 111 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 IRF2BP1Q8IU81 584 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 PRSS58Q8IYP2 241 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 SLC34A3Q8N130 599 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
FNDC1-201ENST00000297267 TOP3BO95985 862 aaKnown RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 FAM187BQ17R55 369 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 SLC9A4Q6AI14 798 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 IQCF2Q8IXL9 164 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 RBM15BQ8NDT2 890 aaKnown RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 PIH1D2Q8WWB5 315 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 DMRTB1Q96MA1 342 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 LRRC19Q9H756 370 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 DHRS12A0PJE2 317 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 TRIM38O00635 465 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 ALAS2P22557 587 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 RHAGQ02094 409 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 PPP1R8Q12972 351 aaKnown RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 SMARCD3Q6STE5 483 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 AHI1Q8N157 1196 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 MOCOSQ96EN8 888 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 VCPIP1Q96JH7 1222 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 BCL9O00512 1426 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 TLR5O60602 858 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 CREB5Q02930 508 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 FAM35AQ86V20 835 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 VSIG10LQ86VR7 867 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 RAVER1Q8IY67 606 aaKnown RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 DEFB119Q8N690 84 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 ANKRD52Q8NB46 1076 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 SLC4A11Q8NBS3 891 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 AUTS2Q8WXX7 1259 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 JSRP1Q96MG2 331 aaPredicted RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 BRINP2Q9C0B6 783 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 MTFR1LQ9H019 292 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 ARHGAP28Q9P2N2 729 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 SERPINA6P08185 405 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 PDHA2P29803 388 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 GRM3Q14832 879 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 ADGRG6Q86SQ4 1221 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 GIPC3Q8TF64 312 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 EXOSC8Q96B26 276 aaKnown RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 CITED4Q96RK1 184 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 PDP1Q9P0J1 537 aaPredicted RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 HBS1LQ9Y450 684 aaKnown RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 TRIM3O75382 744 aaPredicted RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 ULK1O75385 1050 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 CXCL14O95715 111 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 HSPB3Q12988 150 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 CCSAPQ6IQ19 270 aaPredicted RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 PRSS55Q6UWB4 352 aaPredicted RBP15.43■□□□□ 0.06
FNDC1-201ENST00000297267 ABRAXAS1Q6UWZ7 409 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 TMEM134Q9H6X4 195 aa15.43■□□□□ 0.06
FNDC1-201ENST00000297267 CCDC182A6NF36 153 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 AZGP1P25311 298 aaKnown RBP15.42■□□□□ 0.06
FNDC1-201ENST00000297267 SLCO6A1Q86UG4 719 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 RIOX2Q8IUF8 465 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 ZCCHC10Q8TBK6 192 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 NKD1Q969G9 470 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 C19orf60Q96EN9 201 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 BHLHE41Q9C0J9 482 aaPredicted RBP15.42■□□□□ 0.06
FNDC1-201ENST00000297267 INTS7Q9NVH2 962 aaKnown RBP15.42■□□□□ 0.06
FNDC1-201ENST00000297267 WASF2Q9Y6W5 498 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 TGFB3P10600 412 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 CCR3P51677 355 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 PGGT1BP53609 377 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 WNT3AP56704 352 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 TGM3Q08188 693 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 IKBKEQ14164 716 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 GANABQ14697 944 aaKnown RBP15.42■□□□□ 0.06
FNDC1-201ENST00000297267 FAM131AQ6UXB0 335 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 ZNF280BQ86YH2 543 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 PIK3C3Q8NEB9 887 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 APOLD1Q96LR9 279 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 FNDC11Q9BVV2 318 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 NCKAP1Q9Y2A7 1128 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 E9PAM4 449 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 FPGTO14772 594 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 ITM2AO43736 263 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 CLUP10909 449 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 CORO1AP31146 461 aaKnown RBP15.42■□□□□ 0.06
FNDC1-201ENST00000297267 GABRB2P47870 512 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 THOP1P52888 689 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 SMAD3P84022 425 aaKnown RBP15.42■□□□□ 0.06
FNDC1-201ENST00000297267 PCDH1Q08174 1060 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 TAF10Q12962 218 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 ESRP1Q6NXG1 681 aaKnown RBP15.42■□□□□ 0.06
FNDC1-201ENST00000297267 IRGCQ6NXR0 463 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 FAM83AQ86UY5 434 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 KLHL23Q8NBE8 558 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 NAXEQ8NCW5 288 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 TRNT1Q96Q11 434 aaKnown RBP15.42■□□□□ 0.06
FNDC1-201ENST00000297267 PANX3Q96QZ0 392 aa15.42■□□□□ 0.06
FNDC1-201ENST00000297267 GFM1Q96RP9 751 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms