RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 NET1Q7Z628 596 aaPredicted RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 DHDDSQ86SQ9 333 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 FBXW8Q8N3Y1 598 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 LZTR1Q8N653 840 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 COL26A1Q96A83 441 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 TSSK3Q96PN8 268 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 RRN3Q9NYV6 651 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 PPM1HQ9ULR3 514 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 UPK3BL1B0FP48 263 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 UPK3BL2E5RIL1 263 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CLOCKO15516 846 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CYP7B1O75881 506 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 WDR47O94967 919 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ATG7O95352 703 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CXCL14O95715 111 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PSMB9P28065 219 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 LAMB3Q13751 1172 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TRIM60Q495X7 471 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TMCO5AQ8N6Q1 288 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ITFG1Q8TB96 612 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 C19orf60Q96EN9 201 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 MAGEB10Q96LZ2 347 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 PPP1R2P1Q96PQ5 205 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 EBF3Q9H4W6 596 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ZNF556Q9HAH1 456 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ZNF212Q9UDV6 495 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PHIPQ8WWQ0 1821 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PNMA8CA0A1B0GUJ8 204 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TBC1D3BA6NDS4 549 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 DUSP11O75319 330 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 SLC25A14O95258 325 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 TPSB2P20231 275 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TACR2P21452 398 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CTNNB1P35222 781 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 YAP1P46937 504 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 CDK7P50613 346 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PURAQ00577 322 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 TPSAB1Q15661 275 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 AASDHQ4L235 1098 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 SETMARQ53H47 684 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 AARS2Q5JTZ9 985 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 SLC24A5Q71RS6 500 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 MICU2Q8IYU8 434 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FLCNQ8NFG4 579 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 BPIFB6Q8NFQ5 453 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 STAG3L4Q8TBR4 150 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ZC3H15Q8WU90 426 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 LRTOMTQ8WZ04 291 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 HIC2Q96JB3 615 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PRKD2Q9BZL6 878 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 EBF2Q9HAK2 575 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 MIEF1Q9NQG6 463 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ARHGEF3Q9NR81 526 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 VTI1BQ9UEU0 232 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PAPPAQ13219 1627 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 GMFGO60234 142 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 SNUPNO95149 360 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 AHSGP02765 367 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 GLDCP23378 1020 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PSEN1P49768 467 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 NEK3P51956 506 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PRKG2Q13237 762 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 USP41Q3LFD5 358 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PLEKHG4Q58EX7 1191 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 NOL9Q5SY16 702 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 FAM45BPQ6NSW5 357 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TLDC1Q6P9B6 456 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 RBM44Q6ZP01 1051 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 IFNL1Q8IU54 200 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 NIPA2Q8N8Q9 360 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FAM45AQ8TCE6 357 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TMEM159Q96B96 161 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 NACC2Q96BF6 587 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 VAT1Q99536 393 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 VPS4AQ9UN37 437 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CCDC189A1A4V9 331 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 LRRC14BA6NHZ5 514 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PIP5K1BO14986 540 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CNMDO75829 334 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 IGSF6O95976 241 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PIGRP01833 764 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 INHAP05111 366 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 MTHFD1P11586 935 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 HOXA11P31270 313 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 CRATP43155 626 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TUFMP49411 452 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 LIMK2P53671 638 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FBXW4P57775 412 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 LDLRAP1Q5SW96 308 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FRMD7Q6ZUT3 714 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 P3H2Q8IVL5 708 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ARFGAP1Q8N6T3 406 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FBXO22Q8NEZ5 403 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CYB5D2Q8WUJ1 264 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 SLC45A3Q96JT2 553 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FAR2Q96K12 515 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 NR1H4Q96RI1 486 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 POLR3BQ9NW08 1133 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 IMPAD1Q9NX62 359 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PSMD13Q9UNM6 376 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms