RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 NAA50Q9GZZ1 169 aaKnown RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 SLC38A7Q9NVC3 462 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 ABI2Q9NYB9 513 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 LIMD1Q9UGP4 676 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 FBXW11Q9UKB1 542 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 PRRC2BQ5JSZ5 2229 aaKnown RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 C16orf96A6NNT2 1141 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 B4GAT1O43505 415 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 CBFA2T3O75081 653 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 GABRB3P28472 473 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 PPM1FP49593 454 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 TMTC4Q5T4D3 741 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 SDHAF4Q5VUM1 108 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 TAC4Q86UU9 113 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 PCED1BQ96HM7 432 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 FCRL2Q96LA5 508 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 TBATAQ96M53 351 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 DCLK1O15075 740 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 HS6ST1O60243 411 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 SNAP29O95721 258 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 SMPD1P17405 629 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 DAOAP59103 153 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 NRG1Q02297 640 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 ERMP1Q7Z2K6 904 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 SPATA2LQ8IUW3 424 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 CHERPQ8IWX8 916 aaKnown RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 CDYL2Q8N8U2 506 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 SEPT8Q92599 483 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 CENPNQ96H22 339 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 EGFL8Q99944 293 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 ALG2Q9H553 416 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 PPP6CO00743 305 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 ACOT8O14734 319 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 IL5RAQ01344 420 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 PMS2P3Q13401 168 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 NR6A1Q15406 480 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 SPESP1Q6UW49 350 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 FAM126BQ8IXS8 530 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 ITFG1Q8TB96 612 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
SCAF4-201ENST00000286835 HACD3Q9P035 362 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 NME7Q9Y5B8 376 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 GREB1LQ9C091 1923 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 TMEM88BA6NKF7 163 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 BTN3A1O00481 513 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 ARPC2O15144 300 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 SLC2A3P11169 496 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 IMPDH2P12268 514 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 FCGR1AP12314 374 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 MRNIPQ6NTE8 343 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 CRYBG2Q8N1P7 616 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 HM13Q8TCT9 377 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 PLEKHA8Q96JA3 519 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 EXD2Q9NVH0 621 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 KCTD3Q9Y597 815 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 SIPA1L1O43166 1804 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 MAGP20916 626 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 ELK4P28324 431 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 PCSK1P29120 753 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 PIGFQ07326 219 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 GRB7Q14451 532 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 RAB39AQ14964 217 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 GPRIN1Q7Z2K8 1008 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 MILR1Q7Z6M3 343 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 ZC3H7AQ8IWR0 971 aaKnown RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 SFRP1Q8N474 314 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 PPTC7Q8NI37 304 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 ZBED3Q96IU2 234 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 NSUN5Q96P11 429 aaKnown RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 ZBTB18Q99592 522 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 HNRNPABQ99729 332 aaKnown RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 OLFM1Q99784 485 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 SLC39A8Q9C0K1 460 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 OLAHQ9NV23 265 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 SLC22A2O15244 555 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 TREHO43280 583 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 PAGE1O75459 146 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 RSL1D1O76021 490 aaKnown RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 HLA-DQB2P05538 268 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 CLCN5P51795 746 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 DIO3P55073 304 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 DSC2Q02487 901 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 SOX4Q06945 474 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 ANKS6Q68DC2 871 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 ZDHHC13Q8IUH4 622 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 CCDC97Q96F63 343 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
SCAF4-201ENST00000286835 UXTQ9UBK9 157 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-201ENST00000286835 FBP2O00757 339 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 DEAF1O75398 565 aaPredicted RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 ATE1O95260 518 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 S100BP04271 92 aaPredicted RBP13.37□□□□□ -0.27
SCAF4-201ENST00000286835 PSMB9P28065 219 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 CRHR2Q13324 411 aa13.37□□□□□ -0.27
SCAF4-201ENST00000286835 GALNT3Q14435 633 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms