RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 FOXL1Q12952 345 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 GPS1Q13098 491 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 FRG1Q14331 258 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 SLC29A2Q14542 456 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 C19orf54Q5BKX5 351 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 PLAG1Q6DJT9 500 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 RBPMS2Q6ZRY4 209 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 TAF8Q7Z7C8 310 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SLC4A11Q8NBS3 891 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 WDR60Q8WVS4 1066 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.66□□□□□ -1.66
CD44-202ENST00000278385 ARHGAP45Q92619 1136 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 TMCO6Q96DC7 493 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 MRPL38Q96DV4 380 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 SGF29Q96ES7 293 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 ZDHHC12Q96GR4 267 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 ERO1AQ96HE7 468 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 EPSTI1Q96J88 318 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 CAPNS2Q96L46 248 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 ADAD1Q96M93 576 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 DGAT2Q96PD7 388 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 GAL3ST4Q96RP7 486 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SOX7Q9BT81 388 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SLC25A23Q9BV35 468 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 C1QTNF3Q9BXJ4 246 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 MRPL1Q9BYD6 325 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 NFKBIZQ9BYH8 718 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 TRIM31Q9BZY9 425 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 API5Q9BZZ5 524 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 LRRCC1Q9C099 1032 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SLC32A1Q9H598 525 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 STN1Q9H668 368 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 DENND2DQ9H6A0 471 aaPredicted RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 SH2D4AQ9H788 454 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 TTC12Q9H892 705 aaPredicted RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 FANCEQ9HB96 536 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 CD209Q9NNX6 404 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 MYOZ2Q9NPC6 264 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SOHLH2Q9NX45 425 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 ZSCAN32Q9NX65 697 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SIDT1Q9NXL6 827 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 QPCTLQ9NXS2 382 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 RCOR1Q9UKL0 485 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 INTS6Q9UL03 887 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 PPIEQ9UNP9 301 aaKnown RBP4.66□□□□□ -1.66
CD44-202ENST00000278385 ATP11BQ9Y2G3 1177 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 KCNK7Q9Y2U2 307 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SNX9Q9Y5X1 595 aa4.66□□□□□ -1.66
CD44-202ENST00000278385 SCN4AP35499 1836 aa4.65□□□□□ -1.66
CD44-202ENST00000278385 CCDC187A0A096LP49 1063 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 A0A1W2PQM1 296 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 A0A1W2PR48 441 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 XKRY2A2RUG3 117 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 OR2A25A4D2G3 310 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ENO4A6NNW6 628 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 A8MZ25 164 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 PRR5-ARHGAP8B1AHC4 643 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 J3KTA2 159 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 RAB27BO00194 218 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 CXCL11O14625 94 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 SEPT4O43236 478 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 DIAPH2O60879 1101 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 RECQL4O94761 1208 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 VIPP01282 170 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 AMY1AP04745 511 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 RB1P06400 928 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 TPM1P09493 284 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 POLR2MP0CAP2 368 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 SRCP12931 536 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 INSRRP14616 1297 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 JAK1P23458 1154 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ECHS1P30084 290 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 PBX3P40426 434 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 MDH1P40925 334 aaKnown RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 SLC15A1P46059 708 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 SLC11A2P49281 568 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 GZMKP49863 264 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 CAPZA1P52907 286 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 EIF3BP55884 814 aaKnown RBP4.65□□□□□ -1.67
CD44-202ENST00000278385 HUNKP57058 714 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 KIAA1024LP59773 190 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 FKBP1BP68106 108 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ASIC1P78348 528 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 TRDNQ13061 729 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 GPM6BQ13491 265 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ATP1A4Q13733 1029 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 CBFBQ13951 182 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 NEDD9Q14511 834 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ZNF766Q5HY98 468 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 STXBP5Q5T5C0 1151 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 RGMBQ6NW40 437 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 DENND1BQ6P3S1 775 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 ZDHHC24Q6UX98 284 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 MAMDC4Q6UXC1 1216 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 MFSD7Q6UXD7 560 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 LRIG3Q6UXM1 1119 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 SYNE3Q6ZMZ3 975 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 Q6ZVL8 140 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 BNIPLQ7Z465 357 aa4.65□□□□□ -1.67
CD44-202ENST00000278385 SPATA19Q7Z5L4 167 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms