RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PTTG2Q9NZH5 202 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 LMCD1Q9NZU5 365 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 LZTS1Q9Y250 596 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 RWDD3Q9Y3V2 267 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 CCDC78A2IDD5 438 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 TRIM24O15164 1050 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 GPC4O75487 556 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 TFAP2AP05549 437 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 SNRPB2P08579 225 aaKnown RBP12.93□□□□□ -0.34
C9orf3-201ENST00000277198 SLC2A3P11169 496 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 IMPDH1P20839 514 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 SERPINH1P50454 418 aaKnown RBP12.93□□□□□ -0.34
C9orf3-201ENST00000277198 SCNN1GP51170 649 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 MLLT6P55198 1093 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-201ENST00000277198 ERVFC1P60507 584 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 NFKB2Q00653 900 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 LAMB3Q13751 1172 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 FASTKQ14296 549 aaKnown RBP12.93□□□□□ -0.34
C9orf3-201ENST00000277198 SPATA24Q86W54 205 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 UMODL1-AS1Q8N2C9 162 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 L3HYPDHQ96EM0 354 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
C9orf3-201ENST00000277198 KLHL32Q96NJ5 620 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 SERPINB11Q96P15 392 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 UHRF1Q96T88 793 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-201ENST00000277198 NPAS2Q99743 824 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 EFHD1Q9BUP0 239 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 ADA2Q9NZK5 511 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 CACNG4Q9UBN1 327 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 PACSIN3Q9UKS6 424 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 AP4S1Q9Y587 144 aa12.93□□□□□ -0.34
C9orf3-201ENST00000277198 BBIP1A8MTZ0 92 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 TMEM233B4DJY2 109 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 E9PAM4 449 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 LINC01565O15544 149 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 HOXA2O43364 376 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 B3GAT3O94766 335 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 WISP3O95389 354 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 POMCP01189 267 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 TYMPP19971 482 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 TSPY1Q01534 308 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 HYAL1Q12794 435 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 NOMO2Q5JPE7 1267 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 SAMD4BQ5PRF9 694 aaKnown RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 C8orf82Q6P1X6 216 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 SATL1Q86VE3 508 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 CILP2Q8IUL8 1156 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 ROPN1LQ96C74 230 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 NECAB3Q96P71 396 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 SLC2A11Q9BYW1 496 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 RHOBTB2Q9BYZ6 727 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 MFSD1Q9H3U5 465 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 ACSS2Q9NR19 701 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 VWA7Q9Y334 891 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 ZNF638Q14966 1978 aaKnown RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 TCRBV3S1A0A5B6 114 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 ARHGAP10A1A4S6 786 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 MROH6A6NGR9 719 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 CASTOR2A6NHX0 329 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 F8W810 466 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 TNFRSF10BO14763 440 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 PEX11BO96011 259 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.342e-9■■□□□ 12.3
C9orf3-201ENST00000277198 ZNF26P17031 533 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 SLC7A1P30825 629 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 NR1H2P55055 460 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 DLX2Q07687 328 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 APOFQ13790 326 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 SEPT6Q14141 434 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 SPATS1Q496A3 300 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 ACBD5Q5T8D3 534 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 HECTD2Q5U5R9 776 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 REP15Q6BDI9 236 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 EP400NLQ6ZTU2 488 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 RBM23Q86U06 439 aaKnown RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 SPATA6LQ8N4H0 392 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 GOLM1Q8NBJ4 401 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 ZNF597Q96LX8 424 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 OLFM1Q99784 485 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 OSBPL11Q9BXB4 747 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 NSUN3Q9H649 340 aaKnown RBP12.92□□□□□ -0.34
C9orf3-201ENST00000277198 IGFLR1Q9H665 355 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 CD300AQ9UGN4 299 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 TRAF6Q9Y4K3 522 aa12.92□□□□□ -0.34
C9orf3-201ENST00000277198 E7ENX8 843 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 H3BQ06 376 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-201ENST00000277198 STX16-NPEPL1H3BU86 382 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 PDLIM1O00151 329 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 PER2O15055 1255 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 NRP2O60462 931 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 RNASEH2AO75792 299 aaKnown RBP12.91□□□□□ -0.34
C9orf3-201ENST00000277198 STAMBPO95630 424 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 CCDC166P0CW27 439 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 RHOQP17081 205 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 LAG3P18627 525 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 KCNA5P22460 613 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 PGGT1BP53609 377 aa12.91□□□□□ -0.34
C9orf3-201ENST00000277198 SLC5A3P53794 718 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms