RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 TAGAPQ8N103 731 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 OR8H2Q8N162 312 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 EFHBQ8N7U6 833 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 FBXO27Q8NI29 283 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 ZIC5Q96T25 663 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 REXO4Q9GZR2 422 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 PNPLA8Q9NP80 782 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 RBMX2Q9Y388 322 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 STX16-NPEPL1H3BU86 382 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 RFPL1O75677 317 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 ALOX5P09917 674 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 ERCC2P18074 760 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 GRIA1P42261 906 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 CDK9P50750 372 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 TRAF3Q13114 568 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 DLG2Q15700 870 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 CACHD1Q5VU97 1274 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 MARVELD2Q8N4S9 558 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 DBF4BQ8NFT6 615 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 PSMA8Q8TAA3 256 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC35F5Q8WV83 523 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 MFSD3Q96ES6 412 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 FUBP3Q96I24 572 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 QKIQ96PU8 341 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 HOPXQ9BPY8 73 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 SMPD3Q9NY59 655 aaPredicted RBP11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 NUDT5Q9UKK9 219 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 FBXO5Q9UKT4 447 aa11.54□□□□□ -0.56
CLSTN3-201ENST00000266546 TAF4O00268 1085 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM20BO75063 409 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 PCNAP12004 261 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 YWHAQP27348 245 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 GJA8P48165 433 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ENTPD1P49961 510 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CREMQ03060 361 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SH3PXD2AQ5TCZ1 1133 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ZYG11AQ6WRX3 759 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 DNAJC14Q6Y2X3 702 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CUZD1Q86UP6 607 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 POC5Q8NA72 575 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 FBXO30Q8TB52 745 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM120BQ96EK7 910 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF512Q96ME7 567 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF558Q96NG5 402 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC9A7Q96T83 725 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TRIM54Q9BYV2 358 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 PCDHGB4Q9UN71 923 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TRAF6Q9Y4K3 522 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 MYOCOSA0A1B0GUC4 107 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 PPEF2O14830 753 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 VPS4BO75351 444 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 NADKO95544 446 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CCL5P13501 91 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 RFC2P35250 354 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 MRPL28Q13084 256 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TOP3AQ13472 1001 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CCNIQ14094 377 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 GRM3Q14832 879 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 PFKFB4Q16877 469 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM26DQ5JW98 314 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 MBLAC2Q68D91 279 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SPESP1Q6UW49 350 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SYTL1Q8IYJ3 562 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TBC1D21Q8IYX1 336 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ZFP28Q8NHY6 868 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 AZIN2Q96A70 460 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 DPEP3Q9H4B8 488 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 AGO3Q9H9G7 860 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CACYBPQ9HB71 228 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 NT5MQ9NPB1 228 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 C8orf4Q9NR00 106 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 WDR37Q9Y2I8 494 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TMA7Q9Y2S6 64 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC30A1Q9Y6M5 507 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 A0A0J9YYE9 177 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TRIM24O15164 1050 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 VPS26AO75436 327 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CDH13P55290 713 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 MYLK3Q32MK0 819 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ZBED5Q49AG3 693 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TIGD5Q53EQ6 642 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 C10orf120Q5SQS8 335 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ARMC4Q5T2S8 1044 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 AGMOQ6ZNB7 445 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SMYD1Q8NB12 490 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 NDRG1Q92597 394 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TMEM175Q9BSA9 504 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CFHR5Q9BXR6 569 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ROGDIQ9GZN7 287 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 GIN1Q9NXP7 522 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 C3orf18Q9UK00 162 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CRYL1Q9Y2S2 319 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM32AQ9Y421 112 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC22A2O15244 555 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 MYO1DO94832 1006 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 HSMCR30P0CW71 290 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 COL6A2P12110 1019 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 LMO2P25791 158 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms