RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SUPT3HB4E1H0 165 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 ATE1O95260 518 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 SNAP29O95721 258 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 FMO4P31512 558 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 IST1P53990 364 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 HERC3Q15034 1050 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 TIGD2Q4W5G0 525 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 RAB41Q5JT25 222 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 ZNF549Q6P9A3 640 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 POTEHQ6S545 545 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 OSBPL11Q9BXB4 747 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 TMEM181Q9P2C4 612 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 VPS28Q9UK41 221 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 PLXNA1Q9UIW2 1896 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 DLGAP1O14490 977 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 GIPC1O14908 333 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 IRAK2O43187 625 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 C8BP07358 591 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 ZNF23P17027 643 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 ACVRL1P37023 503 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 CCR3P51677 355 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 DCTN2Q13561 401 aaKnown RBP16.79■□□□□ 0.28
SQLE-201ENST00000265896 FGD3Q5JSP0 725 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 SIRPB2Q5JXA9 342 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 PIK3R6Q5UE93 754 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 UGT3A1Q6NUS8 523 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 OR10Q1Q8NGQ4 319 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 C12orf43Q96C57 262 aaKnown RBP16.79■□□□□ 0.28
SQLE-201ENST00000265896 IL12RB2Q99665 862 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 NSMCE4AQ9NXX6 385 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 ASB1Q9Y576 335 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 C5orf42Q9H799 3197 aa16.79■□□□□ 0.28
SQLE-201ENST00000265896 A0A087X1B8 175 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 MAN1A2O60476 641 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 GPX3P22352 226 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 HADHAP40939 763 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 LHX1P48742 406 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 CLCN2P51788 898 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 PMS2P3Q13401 168 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 PAGE3Q5JUK9 113 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 RAP1GAP2Q684P5 730 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 TBPL2Q6SJ96 375 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 LIMS2Q7Z4I7 341 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 SCD5Q86SK9 330 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 ADI1Q9BV57 179 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 SP110Q9HB58 689 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 ENTPD7Q9NQZ7 604 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 INTS7Q9NVH2 962 aaKnown RBP16.78■□□□□ 0.28
SQLE-201ENST00000265896 TCRBV3S1A0A5B6 114 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 J3QRK9 145 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 GOT2P00505 430 aaKnown RBP16.78■□□□□ 0.28
SQLE-201ENST00000265896 HSPA1AP0DMV8 641 aaKnown RBP16.78■□□□□ 0.28
SQLE-201ENST00000265896 HSPA1BP0DMV9 641 aaKnown RBP16.78■□□□□ 0.28
SQLE-201ENST00000265896 HCAR3P49019 387 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 CNTN4Q8IWV2 1026 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 FBXL8Q96CD0 374 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 POLR1BQ9H9Y6 1135 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 CLK4Q9HAZ1 481 aaKnown RBP16.78■□□□□ 0.28
SQLE-201ENST00000265896 BPIFA1Q9NP55 256 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 EXD2Q9NVH0 621 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 TMCO1Q9UM00 188 aa16.78■□□□□ 0.28
SQLE-201ENST00000265896 CDC7O00311 574 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 KCNH1O95259 989 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 S1PR4O95977 384 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 COL6A2P12110 1019 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 ELK4P28324 431 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 UFM1P61960 85 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 BNIP3Q12983 259 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 FRG1Q14331 258 aaKnown RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 RFTN1Q14699 578 aaPredicted RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 C18orf21Q32NC0 220 aaPredicted RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 SLC39A12Q504Y0 691 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 MARC1Q5VT66 337 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 DNAJC14Q6Y2X3 702 aaPredicted RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 GPR141Q7Z602 305 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 PAIP1Q9H074 479 aaKnown RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 PNPLA3Q9NST1 481 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 CDH23Q9H251 3354 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 C17orf102A2RUQ5 167 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 MUSKO15146 869 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 EEF1DP29692 281 aaKnown RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 CD52P31358 61 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 PIK3CGP48736 1102 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 YWHAHQ04917 246 aaPredicted RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 NFYCQ13952 458 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 TSNQ15631 228 aaKnown RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 KIAA0930Q6ICG6 404 aaPredicted RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 OGFOD2Q6N063 350 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 PGBD5Q8N414 524 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 KLHDC9Q8NEP7 349 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 DDI1Q8WTU0 396 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 ISOC1Q96CN7 298 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 DTNBP1Q96EV8 351 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 SEMA3CQ99985 751 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 HAUS8Q9BT25 410 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 EFHD1Q9BUP0 239 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 EPB41L1Q9H4G0 881 aa16.77■□□□□ 0.28
SQLE-201ENST00000265896 POLR3BQ9NW08 1133 aaPredicted RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 PRG3Q9Y2Y8 225 aaPredicted RBP16.77■□□□□ 0.28
SQLE-201ENST00000265896 NDUFAF1Q9Y375 327 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms