RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 MEIOBQ8N635 442 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 INTS7Q9NVH2 962 aaKnown RBP17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 ADGRE2Q9UHX3 823 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 CDK9P50750 372 aaKnown RBP17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 MANFP55145 182 aaKnown RBP17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 BBS12Q6ZW61 710 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 SEMA3CQ99985 751 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 RHOJQ9H4E5 214 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 SEMA3GQ9NS98 782 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 SOHLH2Q9NX45 425 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 PLLPQ9Y342 182 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 PDE2AO00408 941 aaPredicted RBP17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 SLC28A2O43868 658 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 PTPRNQ16849 979 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 ZC3H12AQ5D1E8 599 aaKnown RBP17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 OR52K2Q8NGK3 314 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 ASAH2Q9NR71 780 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 TRAF6Q9Y4K3 522 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 MCIDASD6RGH6 385 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 IFNA16P05015 189 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 DENND1CQ8IV53 801 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 RCN3Q96D15 328 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 ZNF446Q9NWS9 450 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 KRT33AO76009 404 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 SEMA3DO95025 777 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 FAM81AQ8TBF8 368 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 C1QTNF3-AMACRE9PGA6 284 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 TUBA4AP68366 448 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 GIPC3Q8TF64 312 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 TRAPPC12Q8WVT3 735 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 TMEM39AQ9NV64 488 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 CABYRO75952 493 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 PSMA1P25786 263 aaKnown RBP17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 CDH5P33151 784 aaPredicted RBP17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 SULT2A1Q06520 285 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 SLC25A52Q3SY17 297 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 FNBP1LQ5T0N5 605 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 SH3RF1Q7Z6J0 888 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 GPR156Q8NFN8 814 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 RASSF5Q8WWW0 418 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 ASMTP46597 345 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 CDYL2Q8N8U2 506 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 HJURPQ8NCD3 748 aaPredicted RBP17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 A0A1W2PQ72 361 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 CCNDBP1O95273 360 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 PGK1P00558 417 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 AP3S2P59780 193 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 LSM3P62310 102 aaKnown RBP17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 MYBPC1Q00872 1141 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 TYSND1Q2T9J0 566 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 FAM86C2PA6NEL3 165 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 HTR1BP28222 390 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 AP5B1Q2VPB7 878 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 PCDHGA3Q9Y5H0 932 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 NRP2O60462 931 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 LGALS2P05162 132 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 CDC25CP30307 473 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 ERICH5Q6P6B1 374 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 DSELQ8IZU8 1212 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 ADAM2Q99965 735 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 LMO7Q8WWI1 1683 aa17.46■□□□□ 0.39
NOTCH3-201ENST00000263388 TMPRSS11AQ6ZMR5 421 aa17.46■□□□□ 0.38
NOTCH3-201ENST00000263388 CLP1Q92989 425 aaKnown RBP17.46■□□□□ 0.38
NOTCH3-201ENST00000263388 BAIAP2Q9UQB8 552 aa17.46■□□□□ 0.38
NOTCH3-201ENST00000263388 PCM1Q15154 2024 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 WNT10BO00744 389 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 OR5F1O95221 314 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 DHFRP00374 187 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 PCSK2P16519 638 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 PSMD5Q16401 504 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 CRTC3Q6UUV7 619 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 MECRQ9BV79 373 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 SALL3Q9BXA9 1300 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 TCEA3O75764 348 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 HKDC1Q2TB90 917 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 CPTPQ5TA50 214 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 ZDHHC20Q5W0Z9 365 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 ALDH3A2P51648 485 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 FMO1Q01740 532 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 HDAC10Q969S8 669 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 IDI2Q9BXS1 227 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 EXD2Q9NVH0 621 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 DCCP43146 1447 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 A0A0J9YYE9 177 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 CYP4B1P13584 511 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 ARF4P18085 180 aaPredicted RBP17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 CNTN2Q02246 1040 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 BRMS1LQ5PSV4 323 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 MCFD2Q8NI22 146 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 MRTO4Q9UKD2 239 aaKnown RBP17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 AMD1P17707 334 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 ACTR3P61158 418 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 MKL1Q969V6 931 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 MSCO60682 206 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 TBL1XO60907 577 aa17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 RPL7AP62424 266 aaKnown RBP17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 NOL9Q5SY16 702 aaKnown RBP17.45■□□□□ 0.38
NOTCH3-201ENST00000263388 CHSY3Q70JA7 882 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms