RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 INO80DQ53TQ3 878 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 TRIQKQ629K1 86 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 KLHL17Q6TDP4 642 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 ERMP1Q7Z2K6 904 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 TMEM126BQ8IUX1 230 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 ZC3H7AQ8IWR0 971 aaKnown RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 GAB3Q8WWW8 586 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 SAMHD1Q9Y3Z3 626 aaKnown RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 MFHAS1Q9Y4C4 1052 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 NPHS1O60500 1241 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 KRT6AP02538 564 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 KRT6BP04259 564 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 PTPN3P26045 913 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 KRT6CP48668 564 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 MS4A2Q01362 244 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 RFX4Q33E94 735 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 HECTD2Q5U5R9 776 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 WSCD1Q658N2 575 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 MCOLN3Q8TDD5 553 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 SMAD5Q99717 465 aaKnown RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 OCEL1Q9H607 264 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 ZNF221Q9UK13 617 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 FAM25AB3EWG3 89 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 FAM25CB3EWG5 89 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 FAM25GB3EWG6 89 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 SLC25A27O95847 323 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 ARF4P18085 180 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 CYP2B6P20813 491 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 KRT20P35900 424 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 GK3PQ14409 553 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 TIMM50Q3ZCQ8 353 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 TYW3Q6IPR3 259 aaKnown RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 RPS27LQ71UM5 84 aaKnown RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 TMEM132CQ8N3T6 1108 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 ANKLE1Q8NAG6 615 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 REXO5Q96IC2 774 aaKnown RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.2■□□□□ 0.181e-8■■■■■ 31.6
SREBF1-201ENST00000261646 PHRF1Q9P1Y6 1649 aaKnown RBP16.2■□□□□ 0.18
SREBF1-201ENST00000261646 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
SREBF1-201ENST00000261646 BCKDKO14874 412 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PIP5K1BO14986 540 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 UMPSP11172 480 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 HOXB8P17481 243 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 SLC26A3P40879 764 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PTPN9P43378 593 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 ACADVLP49748 655 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 ENPEPQ07075 957 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 C1DQ13901 141 aaKnown RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 MTFMTQ96DP5 389 aaKnown RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 LOC110117498-PIK3R3F6TDL0 507 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PLSCR1O15162 318 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 IL2P60568 153 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 MYBPC1Q00872 1141 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 FBXL19Q6PCT2 694 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 CATSPERGQ6ZRH7 1159 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 GPRIN3Q6ZVF9 776 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 CDH24Q86UP0 819 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 AADATQ8N5Z0 425 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PQLC3Q8N755 202 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 TRPV3Q8NET8 790 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 CATSPERZQ9NTU4 200 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PRR23D1E9PI22 279 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 NTRK1P04629 796 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PRR23D2P0DMB1 279 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 KPNA1P52294 538 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 POLR2JP52435 117 aaKnown RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 ZNF252P-AS1Q0IIN9 211 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 VGLL4Q14135 290 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 RAB39AQ14964 217 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PTPRNQ16849 979 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 ZNF423Q2M1K9 1284 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PACRGLQ8N7B6 248 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 ATP6V0D2Q8N8Y2 350 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 SLC47A1Q96FL8 570 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 GLOD4Q9HC38 313 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 DYRK4Q9NR20 520 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 RCOR3Q9P2K3 495 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PADI4Q9UM07 663 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 RAMP2O60895 175 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 CNPP09543 421 aaKnown RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 SLC5A2P31639 672 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 LHX1P48742 406 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PGGT1BP53609 377 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 MAD2L1Q13257 205 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 NCF4Q15080 339 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 DPYSL2Q16555 572 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 DGKKQ5KSL6 1271 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 INTS11Q5TA45 600 aaKnown RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 FOXB2Q5VYV0 432 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 ARHGAP17Q68EM7 881 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 AHSA2Q719I0 299 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 PAWRQ96IZ0 340 aaKnown RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 FBRSL1Q9HCM7 1045 aaKnown RBP16.19■□□□□ 0.18
SREBF1-201ENST00000261646 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 IKZF3Q9UKT9 509 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 TMED5Q9Y3A6 229 aa16.19■□□□□ 0.18
SREBF1-201ENST00000261646 F8W810 466 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms