RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 PLD1Q13393 1074 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 FAM45BPQ6NSW5 357 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 PGAM4Q8N0Y7 254 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 MDGA1Q8NFP4 955 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 OR6K2Q8NGY2 324 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 FAM45AQ8TCE6 357 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 LRGUKQ96M69 825 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 PRICKLE1Q96MT3 831 aaPredicted RBP11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 KLHL32Q96NJ5 620 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 IL37Q9NZH6 218 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 DNMT3LQ9UJW3 386 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 DTNAQ9Y4J8 743 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 TIMM22Q9Y584 194 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 SQORQ9Y6N5 450 aa11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 COL4A4P53420 1690 aaPredicted RBP11.33□□□□□ -0.6
SLC3A1-201ENST00000260649 C2orf78A6NCI8 922 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 COCHO43405 550 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 PAPSS2O95340 614 aaPredicted RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 FGF1P05230 155 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 RHOCP08134 193 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 LINC00032P0C843 101 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 CORO1AP31146 461 aaKnown RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 TSNQ15631 228 aaKnown RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 SPOUT1Q5T280 376 aaKnown RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 OR52E8Q6IFG1 317 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 PQLC1Q8N2U9 271 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 AFAP1L2Q8N4X5 818 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 BRSK1Q8TDC3 778 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 CCDC68Q9H2F9 335 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 SCUBE2Q9NQ36 999 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 FAM92AA1XBS5 289 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 IQCF5A8MTL0 148 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 ARVCFO00192 962 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 CDC7O00311 574 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 FBP2O00757 339 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 NDUFS3O75489 264 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 IGLV3-27P01718 113 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 HLA-DPA1P20036 260 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 SLC11A2P49281 568 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 YBEYP58557 167 aaPredicted RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 MED21Q13503 144 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 ZRANB3Q5FWF4 1079 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 RNF219Q5W0B1 726 aaPredicted RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 LHX8Q68G74 356 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 REP15Q6BDI9 236 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 SETD3Q86TU7 594 aaPredicted RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 PPP2R3CQ969Q6 453 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 ATP6V1E2Q96A05 226 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 CCDC126Q96EE4 140 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 FEM1CQ96JP0 617 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 GPR21Q99679 349 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 SLC30A3Q99726 388 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 RNF38Q9H0F5 515 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 POLR3BQ9NW08 1133 aaPredicted RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 FKBPLQ9UIM3 349 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 PRPF19Q9UMS4 504 aaKnown RBP11.32□□□□□ -0.6
SLC3A1-201ENST00000260649 MOXD2PA6NHM9 499 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 A8MX80 341 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 NR5A2O00482 541 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 PIP5K1BO14986 540 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 NIPSNAP2O75323 286 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 SEC24AO95486 1093 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 NDST3O95803 873 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 ZNF37AP17032 561 aaPredicted RBP11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 FDXRP22570 491 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 CA8P35219 290 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 MAPKAPK2P49137 400 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 AGTR2P50052 363 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 TWF1Q12792 350 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 GRB7Q14451 532 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 PTPRNQ16849 979 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 FOXB2Q5VYV0 432 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 PSAPL1Q6NUJ1 521 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 FBXL19Q6PCT2 694 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 CYHR1Q6ZMK1 362 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 SLC22A9Q8IVM8 553 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 LILRA2Q8N149 483 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 PELI3Q8N2H9 469 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 CARNMT1Q8N4J0 409 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 ICA1LQ8NDH6 482 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 AUTS2Q8WXX7 1259 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 C19orf60Q96EN9 201 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 MAELQ96JY0 434 aaKnown RBP11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 PKP2Q99959 881 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 AKTIPQ9H8T0 292 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 PDFQ9HBH1 243 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 FNIP2Q9P278 1114 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 PCDHGB4Q9UN71 923 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 PCDHGB5Q9Y5G0 923 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 MYOCOSA0A1B0GUC4 107 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 NPEPPSL1A6NEC2 478 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 MRASO14807 208 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 CRCPO75575 148 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 CDK14O94921 469 aa11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 ALDOCP09972 364 aaKnown RBP11.31□□□□□ -0.6
SLC3A1-201ENST00000260649 SPATA31D3P0C874 917 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms