RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ITIH2P19823 946 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 HLA-DPA1P20036 260 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 HTR1BP28222 390 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CD68P34810 354 aaPredicted RBP11.29□□□□□ -0.6
SF3B6-201ENST00000233468 HNF1BP35680 557 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CTSKP43235 329 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CCT8P50990 548 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 THOP1P52888 689 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 NXPH1P58417 271 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 PCSK7Q16549 785 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 PARP6Q2NL67 630 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 KIF19Q2TAC6 998 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 HLA-BQ31612 363 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 INAVAQ3KP66 663 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 PTAR1Q7Z6K3 402 aaPredicted RBP11.29□□□□□ -0.6
SF3B6-201ENST00000233468 NRSN1Q8IZ57 195 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CCDC89Q8N998 374 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 TADA1Q96BN2 335 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CENPTQ96BT3 561 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 MYOCQ99972 504 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 FAM118BQ9BPY3 351 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 CDH19Q9H159 772 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 TRABDQ9H4I3 376 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 SLC32A1Q9H598 525 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 GAREM1Q9H706 876 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 USP29Q9HBJ7 922 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 MAGEE1Q9HCI5 957 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 KCND1Q9NSA2 647 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 DNAAF2Q9NVR5 837 aaKnown RBP11.29□□□□□ -0.6
SF3B6-201ENST00000233468 FEZ2Q9UHY8 353 aaPredicted RBP11.29□□□□□ -0.6
SF3B6-201ENST00000233468 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
SF3B6-201ENST00000233468 DRG1Q9Y295 367 aaKnown RBP11.29□□□□□ -0.6
SF3B6-201ENST00000233468 ADAMTS20P59510 1910 aa11.29□□□□□ -0.6
SF3B6-201ENST00000233468 C1orf232A0A0U1RR37 186 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 CTAGE9A4FU28 777 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 NPIPB15A6NHN6 443 aaPredicted RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 A8MX80 341 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 PGRMC1O00264 195 aaKnown RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 TAF4O00268 1085 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 MT-CYBP00156 380 aaPredicted RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 PRLP01236 227 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 ITGAVP06756 1048 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 CTPS1P17812 591 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 KELP23276 732 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 CXCR5P32302 372 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 WNT3AP56704 352 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 RALGDSQ12967 914 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 MTM1Q13496 603 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 COL9A2Q14055 689 aaPredicted RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 FGL2Q14314 439 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 CNGA3Q16281 694 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 QPCTQ16769 361 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 ZNF423Q2M1K9 1284 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 ZDHHC20Q5W0Z9 365 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 LRRC66Q68CR7 880 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 DENND2CQ68D51 928 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 GCNT7Q6ZNI0 430 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 Q6ZSR6 202 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 GSTA5Q7RTV2 222 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 NLRP8Q86W28 1048 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 SPATA22Q8NHS9 363 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 C1orf54Q8WWF1 131 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 ZCCHC14Q8WYQ9 949 aaKnown RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 TRIM44Q96DX7 344 aaPredicted RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 RTP4Q96DX8 246 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 NUS1Q96E22 293 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 NSMCE3Q96MG7 304 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 ELF4Q99607 663 aaPredicted RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 KLF6Q99612 283 aaPredicted RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 TMEM121Q9BTD3 319 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 FZD3Q9NPG1 666 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 PKD2L2Q9NZM6 624 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 HACD3Q9P035 362 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 PYCARDQ9ULZ3 195 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 SNX12Q9UMY4 172 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 R3HDM2Q9Y2K5 976 aaKnown RBP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 PCDHGB2Q9Y5G2 931 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 SNX11Q9Y5W9 270 aa11.28□□□□□ -0.6
SF3B6-201ENST00000233468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
SF3B6-201ENST00000233468 CABIN1Q9Y6J0 2220 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 LOC285095A0A1B0GVY8 99 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 TCRBV7S2A1N4TA0A589 114 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 ERI2A8K979 691 aaKnown RBP11.27□□□□□ -0.61
SF3B6-201ENST00000233468 H3BM21 787 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 CACNB4O00305 520 aaPredicted RBP11.27□□□□□ -0.61
SF3B6-201ENST00000233468 SH3BP5O60239 455 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 GAS8O95995 478 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 IFNB1P01574 187 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 WNT1P04628 370 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 ATP1A1P05023 1023 aaKnown RBP11.27□□□□□ -0.61
SF3B6-201ENST00000233468 FGF1P05230 155 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 HOXC4P09017 264 aaPredicted RBP11.27□□□□□ -0.61
SF3B6-201ENST00000233468 ALPIP09923 528 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 TSHRP16473 764 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 FDFT1P37268 417 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 RXRGP48443 463 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 BLKP51451 505 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 CLDN2P57739 230 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 PFN3P60673 137 aa11.27□□□□□ -0.61
SF3B6-201ENST00000233468 GALNT3Q14435 633 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms