RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TMPRSS11EQ9UL52 423 aa13.02□□□□□ -0.32
MSH2-201ENST00000233146 AUP1Q9Y679 476 aa13.02□□□□□ -0.32
MSH2-201ENST00000233146 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 CCDC154A6NI56 674 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 METTL15A6NJ78 407 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 PIGNO95427 931 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 LTFP02788 710 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 GPIP06744 558 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 KRT19P08727 400 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 ERP29P30040 261 aaKnown RBP13.02□□□□□ -0.33
MSH2-201ENST00000233146 CCR10P46092 362 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 HAAOP46952 286 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 NKX3-2P78367 333 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 PRKAA1Q13131 559 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 PON2Q15165 354 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 LAIR2Q6ISS4 152 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 ARSKQ6UWY0 536 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 ZNF517Q6ZMY9 492 aaPredicted RBP13.02□□□□□ -0.33
MSH2-201ENST00000233146 SAMD14Q8IZD0 417 aaPredicted RBP13.02□□□□□ -0.33
MSH2-201ENST00000233146 DEDD2Q8WXF8 326 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 GAD1Q99259 594 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 ACAD9Q9H845 621 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 GMEB2Q9UKD1 530 aa13.02□□□□□ -0.33
MSH2-201ENST00000233146 MRASO14807 208 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 FAM86B2P0C5J1 330 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ITGA2P17301 1181 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 CYP3A5P20815 502 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 PRDX5P30044 214 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 FAPQ12884 760 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 MEP1AQ16819 746 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 GPAT3Q53EU6 434 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ARL13AQ5H913 290 aaPredicted RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 CREB3L2Q70SY1 520 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ZNF534Q76KX8 674 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 PLD3Q8IV08 490 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 C1orf74Q96LT6 269 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 PI4K2AQ9BTU6 479 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 OXSMQ9NWU1 459 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 IPPQ9Y573 584 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 LINC00862A6NCI5 91 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 K7ENM7 598 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ARHGEF9O43307 516 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 MAP3K6O95382 1288 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 SLC25A11Q02978 314 aaKnown RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 SMTNL2Q2TAL5 461 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 BCL7AQ4VC05 210 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 LAYNQ6UX15 382 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 DAW1Q8N136 415 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ANKRD52Q8NB46 1076 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 BDH2Q9BUT1 245 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 TRMT6Q9UJA5 497 aaKnown RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 MAN2B2Q9Y2E5 1009 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 PCDHGB6Q9Y5F9 930 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 MSH4O15457 936 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 SOAT2O75908 522 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 IFNA16P05015 189 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 APRTP07741 180 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ACADMP11310 421 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 LRPAP1P30533 357 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 IL12RB1P42701 662 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 CDK8P49336 464 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 EFR3AQ14156 821 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 CTU2Q2VPK5 515 aaKnown RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 RAB43Q86YS6 212 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 RFX6Q8HWS3 928 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 PAPD5Q8NDF8 572 aaKnown RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 RORBQ92753 470 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ASIC4Q96FT7 647 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ZNF578Q96N58 590 aaPredicted RBP13.01□□□□□ -0.33
MSH2-201ENST00000233146 OPALINQ96PE5 141 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ACCSQ96QU6 501 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 EHD3Q9NZN3 535 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 ANAPC2Q9UJX6 822 aa13.01□□□□□ -0.33
MSH2-201ENST00000233146 E2F8A0AVK6 867 aa13□□□□□ -0.33
MSH2-201ENST00000233146 PLD2O14939 933 aa13□□□□□ -0.33
MSH2-201ENST00000233146 SERPINI2O75830 405 aa13□□□□□ -0.33
MSH2-201ENST00000233146 ZNF30P17039 623 aa13□□□□□ -0.33
MSH2-201ENST00000233146 POU3F3P20264 500 aaPredicted RBP13□□□□□ -0.33
MSH2-201ENST00000233146 MAGEA12P43365 314 aa13□□□□□ -0.33
MSH2-201ENST00000233146 DBPQ10586 325 aaPredicted RBP13□□□□□ -0.33
MSH2-201ENST00000233146 TNK1Q13470 666 aa13□□□□□ -0.33
MSH2-201ENST00000233146 STEAP4Q687X5 459 aa13□□□□□ -0.33
MSH2-201ENST00000233146 BEND5Q7L4P6 421 aa13□□□□□ -0.33
MSH2-201ENST00000233146 MAPKAPK5Q8IW41 473 aa13□□□□□ -0.33
MSH2-201ENST00000233146 C2orf69Q8N8R5 385 aa13□□□□□ -0.33
MSH2-201ENST00000233146 NGRNQ9NPE2 291 aaKnown RBP13□□□□□ -0.33
MSH2-201ENST00000233146 MRPL39Q9NYK5 338 aaKnown RBP13□□□□□ -0.33
MSH2-201ENST00000233146 PNMA8BQ9ULN7 279 aaPredicted RBP13□□□□□ -0.33
MSH2-201ENST00000233146 SNX6Q9UNH7 406 aa13□□□□□ -0.33
MSH2-201ENST00000233146 PSAT1Q9Y617 370 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms