RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PRORSD1PA6NEY8 169 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF839A8K0R7 811 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 CCL22O00626 93 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 ALDH4A1P30038 563 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 CXCR3P49682 368 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 PGFP49763 221 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 CLCNKBP51801 687 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 RPL26P61254 145 aaKnown RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 MRPS15P82914 257 aaKnown RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 PRPSAP1Q14558 356 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 LDB1Q86U70 411 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 LPPQ93052 612 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 MAELQ96JY0 434 aaKnown RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 DGCR6LQ9BY27 220 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 FBRSL1Q9HCM7 1045 aaKnown RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 TRIM39Q9HCM9 518 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 GIMAP4Q9NUV9 329 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 MIOSQ9NXC5 875 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 A0A087WXM4 84 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 KPNA4O00629 521 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 AQP9O43315 295 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 YWHAQP27348 245 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 PCSK7Q16549 785 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 AGKQ53H12 422 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 NIPAL1Q6NVV3 410 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 ARHGAP12Q8IWW6 846 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 PELI3Q8N2H9 469 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 LPGAT1Q92604 370 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLCO4A1Q96BD0 722 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 BEGAINQ9BUH8 593 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 MIR1-1HGQ9H1L0 117 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 NCKIPSDQ9NZQ3 722 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC27A5Q9Y2P5 690 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 AP4S1Q9Y587 144 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 SMIM35A0A1B0GVV1 85 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 RRN3P2A6NIE6 340 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLCO1B7G3V0H7 640 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 TRIM38O00635 465 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 MTSS1O43312 755 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 GUCY1B2O75343 617 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 MT-ND1P03886 318 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 HSPA8P11142 646 aaKnown RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 HOXD8P13378 290 aaPredicted RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 HADHAP40939 763 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 KCNC1P48547 511 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 HSPA13P48723 471 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 ARPP19P56211 112 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 TRIM25Q14258 630 aaKnown RBP9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 RAB41Q5JT25 222 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 CLEC6AQ6EIG7 209 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 PM20D1Q6GTS8 502 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 GPR180Q86V85 440 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 SCAMP5Q8TAC9 235 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 NPLOC4Q8TAT6 608 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 ELMO1Q92556 727 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 VAT1Q99536 393 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC39A8Q9C0K1 460 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 DNAI2Q9GZS0 605 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 PNPLA3Q9NST1 481 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 HACD3Q9P035 362 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 SFMBT1Q9UHJ3 866 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 NEU3Q9UQ49 428 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 RAD54BQ9Y620 910 aa9.41□□□□□ -0.9
HLA-DOA-201ENST00000229829 DOCK3Q8IZD9 2030 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 TTC24A2A3L6 582 aaPredicted RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 HLA-DQB2P05538 268 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 AIF1P55008 147 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 YBX1P67809 324 aaKnown RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 LRP8Q14114 963 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 HERC3Q15034 1050 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 INTS6LQ5JSJ4 861 aaKnown RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 DEPDC1Q5TB30 811 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 BTBD8Q5XKL5 378 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 BTLAQ7Z6A9 289 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 IFNEQ86WN2 208 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 CNTN4Q8IWV2 1026 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 ANKRD49Q8WVL7 239 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 PGAP3Q96FM1 320 aaPredicted RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 LRCH3Q96II8 777 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZFYVE19Q96K21 471 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 GAD1Q99259 594 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 TINF2Q9BSI4 451 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC2A11Q9BYW1 496 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 CACNA2D2Q9NY47 1150 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 FBXO5Q9UKT4 447 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 GPSM3Q9Y4H4 160 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 MBLAC1A4D2B0 266 aaPredicted RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 CASTOR2A6NHX0 329 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 A8MT66 165 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 C9JVG2 144 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 PDHXO00330 501 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC22A2O15244 555 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 MSI1O43347 362 aaKnown RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 CACNG3O60359 315 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 MAFKO60675 156 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 CAPNS1P04632 268 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 MYCLP1P12525 358 aaPredicted RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 BDNFP23560 247 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 ADSLP30566 484 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms