RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 NUDT16L1Q9BRJ7 211 aaKnown RBP7.2□□□□□ -1.26
CCL1-201ENST00000225842 PLA2G2FQ9BZM2 168 aa7.2□□□□□ -1.26
CCL1-201ENST00000225842 ZSCAN16Q9H4T2 348 aaPredicted RBP7.2□□□□□ -1.26
CCL1-201ENST00000225842 CLMPQ9H6B4 373 aa7.2□□□□□ -1.26
CCL1-201ENST00000225842 DDX25Q9UHL0 483 aaKnown RBP7.2□□□□□ -1.26
CCL1-201ENST00000225842 GPR34Q9UPC5 381 aa7.2□□□□□ -1.26
CCL1-201ENST00000225842 PIAS3Q9Y6X2 628 aa7.2□□□□□ -1.26
CCL1-201ENST00000225842 HECTD1Q9ULT8 2610 aa7.2□□□□□ -1.26
CCL1-201ENST00000225842 TENM4Q6N022 2769 aa7.2□□□□□ -1.26
CCL1-201ENST00000225842 ADAMTS20P59510 1910 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 LOXHD1Q8IVV2 1947 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 CYP3A7-CYP3A51PA0A087WV96 503 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 PRAMEF33A0A0G2JMD5 474 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 TMEM150BA6NC51 233 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 MSH4O15457 936 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 HBP1O60381 514 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 NEMFO60524 1076 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 JAK2O60674 1132 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 PRAMEF10O60809 474 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 CSDE1O75534 798 aaKnown RBP7.19□□□□□ -1.26
CCL1-201ENST00000225842 TIPRLO75663 272 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 WDR47O94967 919 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 CTDNEP1O95476 244 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 C1RP00736 705 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 ERBB2P04626 1255 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 PEPDP12955 493 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 CYP3A7P24462 503 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 CCNE1P24864 410 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 HOXC13P31276 330 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 GGT5P36269 586 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 CLNS1AP54105 237 aaKnown RBP7.19□□□□□ -1.26
CCL1-201ENST00000225842 NLRP11P59045 1033 aaKnown RBP7.19□□□□□ -1.26
CCL1-201ENST00000225842 TUBB3Q13509 450 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 CUL4AQ13619 759 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 MEA1Q16626 185 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 ANKRD40Q6AI12 368 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 SLC9A4Q6AI14 798 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 GALNT4Q8N4A0 578 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 LRRC71Q8N4P6 559 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 FAM71DQ8N9W8 422 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 URGCPQ8TCY9 931 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 ING5Q8WYH8 240 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 ATG4AQ8WYN0 398 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 MIEF2Q96C03 454 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 REXO5Q96IC2 774 aaKnown RBP7.19□□□□□ -1.26
CCL1-201ENST00000225842 RSRC1Q96IZ7 334 aaKnown RBP7.19□□□□□ -1.26
CCL1-201ENST00000225842 SERINC2Q96SA4 455 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 HERC2P3Q9BVR0 1158 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 SMYD2Q9NRG4 433 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 EIF2B4Q9UI10 523 aaKnown RBP7.19□□□□□ -1.26
CCL1-201ENST00000225842 BAG5Q9UL15 447 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 PCDHA12Q9UN75 941 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 KCNJ14Q9UNX9 436 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 PCDHA10Q9Y5I2 948 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 MIA3Q5JRA6 1907 aa7.19□□□□□ -1.26
CCL1-201ENST00000225842 VPS37CA5D8V6 355 aaPredicted RBP7.18□□□□□ -1.26
CCL1-201ENST00000225842 BTBD18B2RXH4 712 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 PEX12O00623 359 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 CDX4O14627 284 aaPredicted RBP7.18□□□□□ -1.26
CCL1-201ENST00000225842 CCL16O15467 120 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 TRIAP1O43715 76 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 DOK2O60496 412 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 TMCC2O75069 709 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 ELANEP08246 267 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 CSF1P09603 554 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 FDPSP14324 419 aaKnown RBP7.18□□□□□ -1.26
CCL1-201ENST00000225842 U2AF2P26368 475 aaKnown RBP eCLIP7.18□□□□□ -1.26
CCL1-201ENST00000225842 TMOD1P28289 359 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 THBS4P35443 961 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 RAD52P43351 418 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 CLCN3P51790 818 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 FAM3BP58499 235 aaPredicted RBP7.18□□□□□ -1.26
CCL1-201ENST00000225842 TIRAPP58753 221 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 ACOX1Q15067 660 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 CCNG2Q16589 344 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 CALCRLQ16602 461 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 GEN1Q17RS7 908 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 WDR45BQ5MNZ6 344 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 PPM1LQ5SGD2 360 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 LIN9Q5TKA1 542 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 ANO7Q6IWH7 933 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 RINLQ6ZS11 566 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 Q6ZS52 159 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 B4GALNT4Q76KP1 1039 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 OTUD6AQ7L8S5 288 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 MIER3Q7Z3K6 550 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 IZUMO1Q8IYV9 350 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 FUKQ8N0W3 1084 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 ZNF843Q8N446 348 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 FSIP1Q8NA03 581 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 ADAMTS15Q8TE58 950 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 ELSPBP1Q96BH3 223 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 APOPT1Q96IL0 206 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 FAM84AQ96KN4 292 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 MNTQ99583 582 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 TREX2Q9BQ50 279 aaPredicted RBP7.18□□□□□ -1.26
CCL1-201ENST00000225842 TMEM175Q9BSA9 504 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 TRMT61BQ9BVS5 477 aaKnown RBP7.18□□□□□ -1.26
CCL1-201ENST00000225842 PRDM13Q9H4Q3 707 aa7.18□□□□□ -1.26
CCL1-201ENST00000225842 IL21RQ9HBE5 538 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms