RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 VPS50Q96JG6 964 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 KLHL32Q96NJ5 620 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 GBA3Q9H227 469 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 NSUN3Q9H649 340 aaKnown RBP9.42□□□□□ -0.9
CCDC113-201ENST00000219299 CASS4Q9NQ75 786 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 ATAD3AQ9NVI7 634 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 CTNNAL1Q9UBT7 734 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 MFHAS1Q9Y4C4 1052 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 SNX13Q9Y5W8 968 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 ZSCAN9O15535 394 aaPredicted RBP9.42□□□□□ -0.9
CCDC113-201ENST00000219299 SEC24AO95486 1093 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 METTL18O95568 372 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 PLK1P53350 603 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 TRIM71Q2Q1W2 868 aaKnown RBP9.42□□□□□ -0.9
CCDC113-201ENST00000219299 SLC35B2Q8TB61 432 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM174Q8WUU8 243 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 OVCA2Q8WZ82 227 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 MFSD3Q96ES6 412 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 PANX3Q96QZ0 392 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 NDNQ99608 321 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 CPNE1Q99829 537 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 PAIP1Q9H074 479 aaKnown RBP9.42□□□□□ -0.9
CCDC113-201ENST00000219299 NEUROG2Q9H2A3 272 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 ZNF556Q9HAH1 456 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 FAM95CA0A1B0GW59 222 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 LINC01553A4QN01 128 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 STC2O76061 302 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 AP2A1O95782 977 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 RBP1P09455 135 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 MZF1P28698 734 aaPredicted RBP9.42□□□□□ -0.9
CCDC113-201ENST00000219299 GSTT1P30711 240 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 TTMPQ5BVD1 217 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 OOSP2Q86WS3 158 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 FAR2Q96K12 515 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 SLC2A13Q96QE2 648 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 WRAP53Q9BUR4 548 aaKnown RBP9.42□□□□□ -0.9
CCDC113-201ENST00000219299 DAPK2Q9UIK4 370 aa9.42□□□□□ -0.9
CCDC113-201ENST00000219299 CDV3Q9UKY7 258 aaKnown RBP9.42□□□□□ -0.9
CCDC113-201ENST00000219299 ATXN2Q99700 1313 aaKnown RBP9.42□□□□□ -0.9
CCDC113-201ENST00000219299 LIN7AO14910 233 aaPredicted RBP9.41□□□□□ -0.9
CCDC113-201ENST00000219299 BCL10O95999 233 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 OCM2P0CE71 109 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 OCMP0CE72 109 aaPredicted RBP9.41□□□□□ -0.9
CCDC113-201ENST00000219299 CTSEP14091 401 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 ATP6V1E1P36543 226 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 AP1S1P61966 158 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 B3GNT6Q6ZMB0 384 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 SYTL1Q8IYJ3 562 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 RIN3Q8TB24 985 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 LINC01599Q8WXQ3 324 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 FAM162AQ96A26 154 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 COPS8Q99627 209 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 DDX18Q9NVP1 670 aaKnown RBP9.41□□□□□ -0.9
CCDC113-201ENST00000219299 MARCH5Q9NX47 278 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 TCRBV9S1A1TA0A576 114 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 ALOX15BO15296 676 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 GCATO75600 419 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 CPA3P15088 417 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 MC4RP32245 332 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 HCAR3P49019 387 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 GRM3Q14832 879 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 XKR4Q5GH76 650 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 Q6ZVU0 165 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 STK40Q8N2I9 435 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 RFWD2Q8NHY2 731 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 SKA1Q96BD8 255 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 FEM1CQ96JP0 617 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 TBATAQ96M53 351 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 RBBP8Q99708 897 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 NDEL1Q9GZM8 345 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM245Q9H330 911 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 SOX13Q9UN79 622 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 COMMD3-BMI1R4GMX3 469 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 MYO1GB0I1T2 1018 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 SHBGP04278 402 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 FOSL2P15408 326 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 GRK2P25098 689 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 C21orf59P57076 290 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 RING1Q06587 406 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 N4BP2L1Q5TBK1 243 aaPredicted RBP9.41□□□□□ -0.9
CCDC113-201ENST00000219299 CCDC81Q6ZN84 652 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 ZBTB49Q6ZSB9 765 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 SCD5Q86SK9 330 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 FAM81AQ8TBF8 368 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 RMND5BQ96G75 393 aaPredicted RBP9.41□□□□□ -0.9
CCDC113-201ENST00000219299 MYLK2Q9H1R3 596 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 COPG2Q9UBF2 871 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 A0A0D9SEW6 157 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 HEPACAM2A8MVW5 462 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 FCGR1AP12314 374 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 TTPAP49638 278 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 ATP1A4Q13733 1029 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 HIST2H2ACQ16777 129 aaPredicted RBP9.41□□□□□ -0.9
CCDC113-201ENST00000219299 HIST2H2AA3Q6FI13 130 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 LAYNQ6UX15 382 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 OR4L1Q8NH43 312 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 HERVK_113Q902F9 699 aa9.41□□□□□ -0.9
CCDC113-201ENST00000219299 PRCCQ92733 491 aaPredicted RBP9.41□□□□□ -0.9
CCDC113-201ENST00000219299 GLMNQ92990 594 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms