RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ZNF549Q6P9A3 640 aa18.83■□□□□ 0.61
MBD3-201ENST00000156825 RAVER1Q8IY67 606 aaKnown RBP18.83■□□□□ 0.61
MBD3-201ENST00000156825 VPS35Q96QK1 796 aa18.83■□□□□ 0.61
MBD3-201ENST00000156825 SLC28A3Q9HAS3 691 aa18.83■□□□□ 0.61
MBD3-201ENST00000156825 DMAC2Q9NW81 257 aa18.83■□□□□ 0.61
MBD3-201ENST00000156825 GLYATL1P3A0A0U1RQE8 302 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 ALOX12P18054 663 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 HTR1BP28222 390 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 PSRC1Q6PGN9 363 aaPredicted RBP18.83■□□□□ 0.6
MBD3-201ENST00000156825 C16orf62Q7Z3J2 963 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 SKA1Q96BD8 255 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 TRAPPC9Q96Q05 1148 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 TMEM216Q9P0N5 145 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 TRIM38O00635 465 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 F7P08709 466 aaPredicted RBP18.83■□□□□ 0.6
MBD3-201ENST00000156825 TSPAN19P0C672 248 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 ACRP10323 421 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 ANPEPP15144 967 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 CXCR2P25025 360 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 NMBRP28336 390 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 PEX6Q13608 980 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 PCDH19Q8TAB3 1148 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 FNIP1Q8TF40 1166 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 DLG3Q92796 817 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 UBE2E3Q969T4 207 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 SIX2Q9NPC8 291 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 MYOM1P52179 1685 aa18.83■□□□□ 0.6
MBD3-201ENST00000156825 RPP40O75818 363 aaKnown RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 CFHP08603 1231 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 CYP4B1P13584 511 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 PTSQ03393 145 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 INO80DQ53TQ3 878 aaPredicted RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 INTS11Q5TA45 600 aaKnown RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 SVOPQ8N4V2 548 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 ZNF516Q92618 1163 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 HNRNPABQ99729 332 aaKnown RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 RAD21L1Q9H4I0 556 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 SERHL2Q9H4I8 314 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 SERHLQ9NQF3 203 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 PTPRJQ12913 1337 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 C5orf60A6NFR6 353 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 COPZ1P61923 177 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 NAIF1Q69YI7 327 aaPredicted RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 NEK10Q6ZWH5 1172 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 NET1Q7Z628 596 aaPredicted RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 CENPIQ92674 756 aaPredicted RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 A0A0G2JLL6 359 aaPredicted RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 OR6A2O95222 327 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 KRT75O95678 551 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 CST1P01037 141 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 EPHX1P07099 455 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 PSMA3P25788 255 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 AIF1P55008 147 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 STX4Q12846 297 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 PRRT2Q7Z6L0 340 aaPredicted RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 TMPRSS11BQ86T26 416 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 TMEM51Q9NW97 253 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 GTF2IRD1Q9UHL9 959 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 PPIEQ9UNP9 301 aaKnown RBP18.82■□□□□ 0.6
MBD3-201ENST00000156825 RHOQP17081 205 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 CHRNA4P43681 627 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 GNA12Q03113 381 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 TMEM63BQ5T3F8 832 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 DENND6AQ8IWF6 608 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 MINDY3Q9H8M7 445 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 DAPK2Q9UIK4 370 aa18.82■□□□□ 0.6
MBD3-201ENST00000156825 A8MUI8 341 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 NDST3O95803 873 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 MT-ND1P03886 318 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 TSNQ15631 228 aaKnown RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 TIGD5Q53EQ6 642 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 PTCD3Q96EY7 689 aaKnown RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 DNAJC1Q96KC8 554 aaKnown RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 ACBD6Q9BR61 282 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 TOR4AQ9NXH8 423 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 ZNF232Q9UNY5 417 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 CPQQ9Y646 472 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 CCDC85CA6NKD9 419 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 TK2O00142 265 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 OR6B1O95007 311 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 DAOAP59103 153 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 CREMQ03060 361 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 KHDRBS2Q5VWX1 349 aaKnown RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 ZNF57Q68EA5 555 aaPredicted RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 DHDDSQ86SQ9 333 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 RALGPS2Q86X27 583 aaPredicted RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 QKIQ96PU8 341 aaKnown RBP eCLIP18.81■□□□□ 0.6
MBD3-201ENST00000156825 A0A087WXM4 84 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 SLC22A3O75751 556 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 LCA5LO95447 670 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 AP2A1O95782 977 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 ADH1CP00326 375 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 ZBTB48P10074 688 aaPredicted RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 PAX7P23759 505 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 PARP15Q460N3 678 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 TRMT10BQ6PF06 316 aaKnown RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.81■□□□□ 0.6
MBD3-201ENST00000156825 FAIM2Q9BWQ8 316 aa18.81■□□□□ 0.6
MBD3-201ENST00000156825 A0A0J9YYE9 177 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms