RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Fbxw10Q5SUS0 1030 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 PostnQ62009 838 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Sema4aQ62178 760 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Gpr17Q6NS65 339 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Asic1Q6NXK8 526 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Prl3a1Q78Y73 227 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Plekha6Q7TQG1 1173 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Pced1bQ8BGX1 433 aaKnown RBP4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Klhl26Q8BGY4 606 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Il17reQ8BH06 637 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Mblac2Q8BL86 279 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Dzank1Q8C008 778 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 PreplQ8C167 725 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 MtrrQ8C1A3 696 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Brat1Q8C3R1 822 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Q8CDS7 251 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Brd3Q8K2F0 726 aaKnown RBP4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Socs4Q91ZA6 436 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Cts3Q91ZD5 332 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Krt23Q99PS0 422 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Cmtm8Q9CZR4 173 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 IgtpQ9DCE9 423 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Cts8Q9JI81 333 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 ItgaxQ9QXH4 1169 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Zbp1Q9QY24 411 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Smok1Q9QYZ4 484 aa4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Tjp2Q9Z0U1 1167 aaKnown RBP4.37□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Akap13E9Q394 2776 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Fam71f2B2RXB0 297 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Lce1fB9EJP6 147 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Acp4D3YTS9 425 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Pcdh17E9PXF0 1157 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Znf568E9PYI1 671 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Vmn1r176G3UW31 304 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Smarce1O54941 411 aaKnown RBP4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Ptpn20O55082 426 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Avpr2O88721 371 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Dnajb5O89114 348 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Rb1P13405 921 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 H2-Q8P14430 326 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Sipa1P46062 1037 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Anxa5P48036 319 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Slc11a2P49282 568 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Mc4rP56450 332 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 CstaP56567 97 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Ikzf1Q03267 517 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Zbtb48Q1H9T6 681 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 MlxipQ2VPU4 917 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Calr4Q3TQS0 420 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Zfp217Q3U0X6 1041 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Foxr1Q3UTB7 268 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Gm527Q4KL13 310 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Nxf2Q4ZGD8 691 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Sun3Q5SS91 320 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Atp13a4Q5XF90 1193 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Cldn11Q60771 207 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 DbpQ60925 325 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Fgfr3Q61851 801 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 NovQ64299 354 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 RetsatQ64FW2 609 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Mvb12aQ78HU3 271 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Tas2r13Q7M720 305 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Slc36a3Q811P0 477 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 C8bQ8BH35 589 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 B3glctQ8BHT6 489 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 BmperQ8CJ69 685 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Rbm47Q91WT8 590 aaKnown RBP4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 DeraQ91YP3 318 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Dnajc3Q91YW3 504 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Ube2sQ921J4 223 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Snx7Q9CY18 387 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Fam111aQ9D2L9 613 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Sgf29Q9DA08 293 aaKnown RBP4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Cldn14Q9Z0S3 239 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Cacna1aP97445 2368 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Ep300B2RWS6 2412 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 TprF6ZDS4 2431 aaKnown RBP4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Atg2bQ80XK6 2075 aa4.36□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Gm13283A0A087WPG5 182 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 4930595M18RikA2RRY9 829 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Wdr95D3Z7A8 784 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Gm7714E9Q079 131 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Gm2237E9Q501 211 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Zfp707F6QUN2 391 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Gm42421F6X8D5 166 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Gimap9G3X987 291 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Grip2G3XA20 1042 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Gm8298J3QPI0 401 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Vmn2r54K7N649 806 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Edil3O35474 480 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Limk2O54785 638 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Dnase1l3O55070 310 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Coro1aO89053 461 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Il2raP01590 268 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Msh3P13705 1091 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Fcer2P20693 331 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Hmx3P42581 356 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Cdx2P43241 311 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 TshrP47750 764 aa4.35□□□□□ -1.71
Hmgb1-203ENSMUST00000110505 Nol4P60954 483 aa4.35□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 85.9 ms