RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 RgccQ9DBX1 137 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ndst3Q9EQH7 873 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ccnl2Q9JJA7 518 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pde7bQ9QXQ1 446 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ak1Q9R0Y5 194 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ccdc166S4R181 449 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm2888K7N746 267 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slc6a6O35316 621 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 CaskO70589 926 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Morf4l1P60762 362 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Znf746Q3U133 652 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Garnl3Q3V0G7 1038 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Zbtb2Q3V3W4 514 aaKnown RBP8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 GpamQ61586 827 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sema4cQ64151 834 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Otop2Q80SX5 563 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Lrrc8aQ80WG5 810 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mr1Q8HWB0 341 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Slc22a6Q8VC69 545 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr1093Q8VF14 322 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pnp2Q9D8C9 305 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Efcab9Q9DAM2 216 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 PmpcaQ9DC61 524 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr632Q9EPN9 317 aa8.96□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Adam10O35598 749 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Otx2P80206 289 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Xkr7Q5GH64 580 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Brip1Q5SXJ3 1174 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Traf3Q60803 567 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 PtprcapQ64697 197 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Krba1Q6NXZ1 1043 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Eri1Q7TMF2 345 aaKnown RBP8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ccdc58Q8R3Q6 144 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Atxn7Q8R4I1 867 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr821Q8VG45 310 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rab30Q923S9 203 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Znf687Q9D2D7 1237 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mau2Q9D2X5 619 aaKnown RBP8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Akr1c12Q9JLI0 323 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm2012B1B0R1 212 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cyp2c23E9Q5K4 494 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm21319F6YNI8 144 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm3633L7N233 213 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tnfaip1O70479 316 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Defa-rs1P17533 116 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gna14P30677 355 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Grin1P35438 938 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Cd86P42082 309 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rap2bP61226 183 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tra2bP62996 288 aaKnown RBP8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Obox7Q4KL20 218 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Jmjd4Q8BFT6 427 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Vipas39Q8BGQ1 491 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Lrfn5Q8BXA0 719 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 LipfQ9CPP7 395 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pramef6A2A8M8 474 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 CercamA3KGW5 592 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm9602J3QPD5 205 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Casp12O08736 419 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Fpr-s1O08790 351 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Fpr2O88536 351 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tpst2O88856 376 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 B3gnt4Q1RLK6 350 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Miga1Q4QQM5 600 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Xrcc1Q60596 631 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Kcnc3Q63959 769 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr1126Q7TR49 314 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Fam205cQ80YD3 371 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Snx14Q8BHY8 964 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ctdsp2Q8BX07 270 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 TpbglQ8C013 384 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rnf170Q8CBG9 286 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr860Q8VFF7 317 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr806Q8VFI2 313 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr805Q8VFI4 319 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pcdha7Q91Y13 937 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Pcdha5Q91Y15 934 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hemk1Q921L7 340 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mrpl24Q9CQ06 216 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 PigbQ9JJQ0 542 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 CnmdQ9Z1F6 334 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Per1O35973 1291 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Lrrc6O88978 473 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Mov10P23249 1004 aaKnown RBP8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 YwhaqP68254 245 aaKnown RBP8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Nos3P70313 1202 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Bend4P86174 541 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gfod1Q3UHD2 390 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm5169Q5M8P2 212 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Klhl6Q6V595 619 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 LsampQ8BLK3 341 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 HhatQ8BMT9 499 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Acaa2Q8BWT1 397 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gin1Q8K259 518 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Aspscr1Q8VBT9 550 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Camk1Q91YS8 374 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Def8Q99J78 448 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Psmd8Q9CX56 353 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Dusp12Q9D0T2 339 aa8.95□□□□□ -0.98
Clcn3-202ENSMUST00000056508 GgctQ9D7X8 188 aa8.95□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms