RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 PollQ9QXE2 573 aaKnown RBP11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cpxm1Q9Z100 722 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fndc3c1Q6DFV6 1356 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ceacam3E9Q6J4 706 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 PfkmP47857 780 aaKnown RBP11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Snx16Q8C080 344 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mab21L3Q8CI17 429 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Chchd6Q91VN4 273 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 NlnQ91YP2 704 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Lrrc4Q99PH1 652 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Serpinb11Q9CQV3 388 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ccdc81Q9D5W4 654 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Keap1Q9Z2X8 624 aaKnown RBP11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ssxb6A2BI74 170 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Zfp963D3Z2T8 383 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc6a20bO88575 635 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 PolP11369 1281 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rpl36P47964 105 aaKnown RBP11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Drd4P51436 387 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Grm1P97772 1199 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Yy2Q3TTC2 378 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fam131bQ3TY60 332 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rbl1Q64701 1063 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rsbn1Q80T69 795 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 HomezQ80W88 542 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Thop1Q8C1A5 687 aaKnown RBP11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tmem252Q8C353 183 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc6a20aQ8VDB9 592 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pcdhga6Q91XY2 932 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Apbb2Q9DBR4 760 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn2r11E9Q4X4 861 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pdzd7E9Q9W7 1021 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gria2P23819 883 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 PamP97467 979 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Zpbp2Q6X786 326 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 IfneQ80ZF2 192 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 LzicQ8K3C3 190 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 IlkapQ8R0F6 392 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Syt12Q920N7 421 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc35a5Q921R7 437 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Atp6v1c2Q99L60 427 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mov10l1Q99MV5 1187 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slamf8Q9D3G2 278 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Plod3Q9R0E1 741 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 NbnQ9R207 751 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ap1m2Q9WVP1 423 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Adh6bA0A1D5RMB0 384 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm21731A0A286YDE9 180 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Kctd18E0CZ26 429 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm2237E9Q501 211 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm21897J3KMP5 500 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm3591K7N6X2 186 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm21750L7N228 499 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gria1P23818 907 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 AdslP54822 484 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 UtyP79457 1212 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Olfr325Q5NCD2 326 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mfn2Q80U63 757 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Plekhn1Q8C886 359 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc15a5Q8CBB2 566 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Abhd11Q8K4F5 307 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Smok1Q9QYZ4 484 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rad21l1A2AU37 552 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 BC024978J3QPC3 361 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 AprtP08030 180 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 TankP70347 448 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Kcnk9Q3LS21 402 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Olfr813Q7TRH5 310 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pi4k2bQ8CBQ5 469 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 BroxQ8K2Q7 411 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mrpl1Q99N96 336 aaKnown RBP11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ogfod2Q9CQ04 349 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gsk3bQ9WV60 420 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pcdh7A0A0A6YY83 1255 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Lzts3A2AHG0 700 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Zfp651E9PZ11 729 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 SmgcF6VRN1 385 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 IppP28575 584 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mc1rQ01727 315 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Armc7Q3UJZ3 198 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 RetsatQ64FW2 609 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 BegainQ68EF6 600 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 TiprlQ8BH58 271 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc46a2Q8CA03 479 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Sike1Q9CPR7 207 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc23a1Q9Z2J0 605 aa11.32□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Taf1Q80UV9 1891 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 A530032D15RikE9Q422 215 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pdha2P35487 391 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pou1f1Q00286 291 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 BcheQ03311 603 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Smyd5Q3TYX3 416 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Nr2c1Q505F1 590 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mppe1Q80XL7 396 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Asb14Q8C6Y6 587 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cstf2tQ8C7E9 632 aaKnown RBP11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Lrrc66Q8K0B3 872 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Olfr30Q8VGD8 315 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Trem2Q99NH8 227 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Kdm8Q9CXT6 414 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms