RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Cldn24D3YXJ9 220 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 F830016B08RikG3UWE2 416 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 MycP01108 439 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Impdh1P50096 514 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Foxr1Q3UTB7 268 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Itm2aQ61500 263 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Dlx3Q64205 287 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Nqo1Q64669 274 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ephx4Q6IE26 359 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Cyp2c54Q6XVG2 490 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Slc39a14Q75N73 489 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Dsg1bQ7TSF1 1060 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Krt75Q8BGZ7 551 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gabra5Q8BHJ7 463 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ston2Q8BZ60 895 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Rbm47Q91WT8 590 aaKnown RBP8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ubxn11Q9D572 484 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Borcs5Q9D920 195 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 MycsQ9Z304 431 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 PhipQ8VDD9 1821 aaKnown RBP8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Vmn2r46L7N282 809 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Msr1P30204 458 aaKnown RBP8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Pcgf5Q3UK78 256 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Akr1clQ3UXL1 322 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 RgnQ64374 299 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Sh3d19Q91X43 789 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 MpstQ99J99 297 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Clstn3Q99JH7 956 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 NckipsdQ9ESJ4 714 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Hao2Q9NYQ2 353 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 LipaQ9Z0M5 397 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Il18rapQ9Z2B1 614 aa8.49□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 4930444G20RikD3Z741 495 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Akain1G3UWD5 69 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Prkag1O54950 330 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Cxcr3O88410 367 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Rpl26P61255 145 aaKnown RBP8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Inf2Q0GNC1 1273 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Parp3Q3ULW8 533 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Clhc1Q5M6W3 596 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Nrg1Q6DR99 700 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Spp2Q8K1I3 203 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 LzicQ8K3C3 190 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Pcdhb21Q91V48 774 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Golm1Q91XA2 393 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Tma16Q9CR02 221 aaKnown RBP8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gm5751A2AHC8 147 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ralgps1A2AR50 585 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Iqca1lA6H690 825 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Zbed6D2EAC2 980 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Kifc5bE9PUA5 672 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 NficP70255 439 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Cyb5d1Q5NCY3 228 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Eps15l1Q60902 907 aaKnown RBP8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 PigaQ64323 485 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Usp8Q80U87 1080 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Reps2Q80XA6 521 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gtf2a2Q80ZM7 109 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 1700001K19RikQ80ZT1 219 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Sgpl1Q8R0X7 568 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Atg10Q8R1P4 215 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 MiosQ8VE19 875 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Coro1aO89053 461 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 B3gntl1Q3U129 357 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Rnf145Q5SWK7 663 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 BoraQ8BS90 525 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 GrpQ8R1I2 146 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gramd1aQ8VEF1 722 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Pmf1Q9CPV5 202 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 AcadsbQ9DBL1 432 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Trpc4apQ9JLV2 797 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Lgr4A2ARI4 951 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gm8011K7N6Y5 207 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Lrrc23O35125 340 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ppef1O35655 650 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Psmc3O88685 442 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Serpina3cP29621 417 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 FynP39688 537 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 CratP47934 626 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Ap1s1P61967 158 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Col28a1Q2UY11 1141 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 StradaQ3UUJ4 431 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Cntn4Q69Z26 1026 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Nlgn2Q69ZK9 836 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 WtipQ7TQJ8 398 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Them6Q80ZW2 207 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Olfr697Q8VFM4 317 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Fam90a1bQ9D4F3 419 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Vmn1r2A2AMT6 306 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gm7073E9QAS1 335 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Nccrp1G3X9C2 266 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Fzd1O70421 642 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Lsp1P19973 330 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Gpatch4Q3TFK5 415 aaKnown RBP8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Jak2Q62120 1129 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Utp14bQ6EJB6 756 aaKnown RBP8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Serpinb9dQ8BMT0 377 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Slc36a1Q8K4D3 475 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Mtfr1Q99MB2 328 aa8.48□□□□□ -1.05
Sf3b1-201ENSMUST00000027127 Lgals2Q9CQW5 130 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms