RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Klhl42Q8BFQ9 493 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Slc45a1Q8BIV7 751 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gtf3c4Q8BMQ2 817 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gtf2a1lQ8R4I4 468 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr1361Q8VFH0 317 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Slc29a1Q9JIM1 460 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 H2afb2S4R1M3 115 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Adgra2Q91ZV8 1336 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm13276A0A087WR18 182 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pramef20B1ARV6 477 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Trim12cD3Z3L3 497 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm3248K7N721 186 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cxcr3O88410 367 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gpr65Q61038 337 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Arnt2Q61324 712 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 GapdhsQ64467 440 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tmem270Q6UJB9 264 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Smpd4Q6ZPR5 823 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Vwa2Q70UZ7 791 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Kirrel2Q7TSU7 700 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp438Q8BFX2 798 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp719Q8BIV1 735 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mrps35Q8BJZ4 320 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Thop1Q8C1A5 687 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Bag5Q8CI32 447 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Slc47a1Q8K0H1 567 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gsto2Q8K2Q2 248 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Plcl2Q8K394 1128 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mtmr14Q8VEL2 648 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 GneQ91WG8 722 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 DeraQ91YP3 318 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Slco1a5Q91YY5 670 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ppp1r16aQ923M0 524 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Sdcbp2Q99JZ0 292 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tbc1d21Q9D9D3 336 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Xrn2Q9DBR1 951 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gpc6Q9R087 555 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm28168A0A087WNP1 180 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 2210016F16RikG3X8U3 338 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pole2O54956 527 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rhox6O70238 227 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 MaptP10637 733 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zfp280bQ505F4 534 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Znf185Q62394 352 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Trim24Q64127 1051 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ssx9Q6XAS3 170 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr1037Q7TR84 321 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pcid2Q8BFV2 399 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fnbp1lQ8K012 605 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fam136aQ9CR98 138 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Atp5oQ9DB20 213 aaKnown RBP10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fut2Q9JL27 347 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tle2Q9WVB2 767 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lrp5Q91VN0 1614 aa10.88□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm10424A0A0J9YVD0 481 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 TriqkB2B9E1 86 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm10477F6SW83 55 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm7971J3QMM8 481 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 BC024978J3QPC3 361 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Coro1aO89053 461 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pgk1P09411 417 aaKnown RBP10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 C2P21180 760 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 InaP46660 501 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 ArvcfP98203 962 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ctnnb1Q02248 781 aaKnown RBP10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Larp7Q05CL8 570 aaKnown RBP10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ebf1Q07802 591 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cntnap5bQ0V8T8 1292 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 MogQ61885 246 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Letm2Q7TNU7 480 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tmem198Q8BG75 360 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lca5lQ8C0X0 741 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 DenrQ9CQJ6 198 aaKnown RBP10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 CenpsQ9D084 142 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ddi1Q9DAF3 408 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rhox9Q9EQM5 227 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pi16Q9ET66 489 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Polr2aP08775 1970 aaKnown RBP10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fndc3c1Q6DFV6 1356 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ubr3Q5U430 1889 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Iqca1lA6H690 825 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Vmn2r74E9PW21 853 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Srp72F8VQC1 671 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Atxn1lP0C7T6 687 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lire1P11260 357 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Col6a2Q02788 1034 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Grid2Q61625 1007 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zpbp2Q6X786 326 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Atp2c1Q80XR2 918 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Smarcal1Q8BJL0 910 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Anapc2Q8BZQ7 837 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Sh2d5Q8JZW5 429 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 OoepQ9CWE6 164 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 QkiQ9QYS9 341 aaKnown RBP10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tle6Q9WVB3 581 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Smpd2O70572 419 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Kcnj2P35561 428 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tead2P48301 445 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 St3gal1P54751 337 aa10.87□□□□□ -0.67
Msh3-201ENSMUST00000022220 St14P56677 855 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms