RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 CENPAP49450 140 aa14.37□□□□□ -0.11
SCARB2-208ENST00000638372 SFSWAPQ12872 951 aaKnown RBP14.37□□□□□ -0.11
SCARB2-208ENST00000638372 SPESP1Q6UW49 350 aa14.37□□□□□ -0.11
SCARB2-208ENST00000638372 SCLYQ96I15 445 aa14.37□□□□□ -0.11
SCARB2-208ENST00000638372 PCYT2Q99447 389 aa14.37□□□□□ -0.11
SCARB2-208ENST00000638372 TRMOQ9BU70 441 aa14.37□□□□□ -0.11
SCARB2-208ENST00000638372 RHBDL2Q9NX52 303 aa14.37□□□□□ -0.11
SCARB2-208ENST00000638372 NPEPPSL1A6NEC2 478 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 TRAFD1O14545 582 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 PAX7P23759 505 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 CRATP43155 626 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 SMARCB1Q12824 385 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 PPP1R15BQ5SWA1 713 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 ZNF781Q8N8C0 355 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 DDX1Q92499 740 aaKnown RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 ESAMQ96AP7 390 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 PHF21AQ96BD5 680 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 ADPRHL2Q9NX46 363 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 HECAQ9UBI9 543 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 EME2A4GXA9 379 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 NRP2O60462 931 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 XKR6Q5GH73 641 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 FSTL5Q8N475 847 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 DDHD1Q8NEL9 900 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 CLHC1Q8NHS4 586 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 LENG8Q96PV6 779 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 ZFP37Q9Y6Q3 630 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 TGM3Q08188 693 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 CCDC142Q17RM4 750 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 TRIM16LQ309B1 348 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 APLFQ8IW19 511 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 PTCD3Q96EY7 689 aaKnown RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 TNKS2Q9H2K2 1166 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 IQCF5A8MTL0 148 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 CCDC157Q569K6 752 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 CDCA2Q69YH5 1023 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 TMCO5AQ8N6Q1 288 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 ARL14EPQ8N8R7 260 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-208ENST00000638372 NACC2Q96BF6 587 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 TSSK3Q96PN8 268 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 TOPAZ1Q8N9V7 1692 aa14.36□□□□□ -0.11
SCARB2-208ENST00000638372 TLL1O43897 1013 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 RECQL5O94762 991 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 HPGDP15428 266 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 MAPK9P45984 424 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 IDH2P48735 452 aaKnown RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 RALGDSQ12967 914 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 PAGE2BQ5JRK9 111 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 CHPFQ8IZ52 775 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 SLC35F5Q8WV83 523 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 REPS1Q96D71 796 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 RPL10LQ96L21 214 aaKnown RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 KLHL28Q9NXS3 571 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 KIAA1522Q9P206 1035 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 ZNF142P52746 1687 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 A0A0J9YYE9 177 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 FAM220BPB1ANY3 271 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 CA12O43570 354 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 COL6A2P12110 1019 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 NELFEP18615 380 aaKnown RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 CES1P23141 567 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 POLD2P49005 469 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 RPS24P62847 133 aaKnown RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 ZC3H3Q8IXZ2 948 aaKnown RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 CXorf40AQ8TE69 158 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 COL26A1Q96A83 441 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 DGCR6LQ9BY27 220 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 BCO2Q9BYV7 579 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 TMEM245Q9H330 911 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 DUSP12Q9UNI6 340 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 KDM3BQ7LBC6 1761 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 A0A1B0GVM2 712 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 TCAF2A6NFQ2 919 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 CXorf49A8MYA2 514 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 IRAK2O43187 625 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 FAM20BO75063 409 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 RPN2P04844 631 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 HPCAL1P37235 193 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 DGCR6Q14129 220 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 OLFML1Q6UWY5 402 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 GPR180Q86V85 440 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 KIAA2013Q8IYS2 634 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 ATL1Q8WXF7 558 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 TRAPPC9Q96Q05 1148 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 TSEN34Q9BSV6 310 aaKnown RBP14.35□□□□□ -0.11
SCARB2-208ENST00000638372 THOP1P52888 689 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 ACLYP53396 1101 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 TSTD2Q5T7W7 516 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 SLCO2A1Q92959 643 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 TADA1Q96BN2 335 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 PPP1R16AQ96I34 528 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 PPM1MQ96MI6 270 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 BRD9Q9H8M2 597 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 IGSF9Q9P2J2 1179 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 VPS51Q9UID3 782 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 KCNE2Q9Y6J6 123 aa14.35□□□□□ -0.11
SCARB2-208ENST00000638372 NEMP2A6NFY4 417 aa14.34□□□□□ -0.11
SCARB2-208ENST00000638372 ITPKAP23677 461 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms