RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 PCDH12Q9NPG4 1184 aa18.7■□□□□ 0.58
PNKP-224ENST00000631020 GGT7Q9UJ14 662 aa18.7■□□□□ 0.58
PNKP-224ENST00000631020 PHTF1Q9UMS5 762 aa18.7■□□□□ 0.58
PNKP-224ENST00000631020 ITM2BQ9Y287 266 aa18.7■□□□□ 0.58
PNKP-224ENST00000631020 PPIL1Q9Y3C6 166 aa18.7■□□□□ 0.58
PNKP-224ENST00000631020 FADS3Q9Y5Q0 445 aa18.7■□□□□ 0.58
PNKP-224ENST00000631020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 A0A1W2PQ67 120 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 FAM47DPA6NHR8 397 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 VILLO15195 856 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 RAD51CO43502 376 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 PLRG1O43660 514 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 USP12O75317 370 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 NDST3O95803 873 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 EPOP01588 193 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 ATXN1LP0C7T5 689 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 CTPS1P17812 591 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 CA4P22748 312 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 IVDP26440 423 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 RPL26P61254 145 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 POLR2LP62875 67 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 FOXC1Q12948 553 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 DHX34Q14147 1143 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 GALNT3Q14435 633 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 QPCTQ16769 361 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 ZNF423Q2M1K9 1284 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 GLRX5Q86SX6 157 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 PAF1Q8N7H5 531 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 OR14C36Q8NHC7 312 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 IFT43Q96FT9 208 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 PPP1R2P1Q96PQ5 205 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 APOL2Q9BQE5 337 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 TRIM51Q9BSJ1 452 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 FICDQ9BVA6 458 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 RPL26L1Q9UNX3 145 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 FNDC3AQ9Y2H6 1198 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 SPAARA0A1B0GVQ0 90 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 CTAGE15A4D2H0 777 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 ANKRD66B4E2M5 251 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 RIOK3O14730 519 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 FLRT2O43155 660 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 CBFA2T3O75081 653 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 AP2A1O95782 977 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 ALPIP09923 528 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 CTAGE8P0CG41 777 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 CTSKP43235 329 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 CCDC15Q0P6D6 951 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 SUZ12Q15022 739 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 TRIP6Q15654 476 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 SLC1A5Q15758 541 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 SIRPB2Q5JXA9 342 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 DENND5AQ6IQ26 1287 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 SYDE1Q6ZW31 735 aaPredicted RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 CTAGE6Q86UF2 777 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 CTAGE4Q8IX94 777 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 SLC25A41Q8N5S1 370 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 NOA1Q8NC60 698 aaKnown RBP18.69■□□□□ 0.58
PNKP-224ENST00000631020 MNS1Q8NEH6 495 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 RAB7BQ96AH8 199 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 SCRN2Q96FV2 425 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 ADGRE3Q9BY15 652 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 IL21RQ9HBE5 538 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 PCOLCE2Q9UKZ9 415 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 SNX11Q9Y5W9 270 aa18.69■□□□□ 0.58
PNKP-224ENST00000631020 CACNA1BQ00975 2339 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 A0A0J9YYE9 177 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 A0A0U1RQS6 177 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 TCRBV7S3A2A0A539 114 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 A8MX80 341 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 AP1G1O43747 822 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 PCDHGA12O60330 932 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 TRBC1P01850 177 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 APRTP07741 180 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 XPAP23025 273 aaPredicted RBP18.68■□□□□ 0.58
PNKP-224ENST00000631020 HNF1BP35680 557 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 GRIA1P42261 906 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 FAM193AP78312 1265 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 BASP1P80723 227 aaKnown RBP18.68■□□□□ 0.58
PNKP-224ENST00000631020 MMGT1Q8N4V1 131 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 CEP112Q8N8E3 955 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 LRRN4CLQ8ND94 238 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 CPT1BQ92523 772 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 MCCC1Q96RQ3 725 aaPredicted RBP18.68■□□□□ 0.58
PNKP-224ENST00000631020 FSD1LQ9BXM9 530 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 EBF2Q9HAK2 575 aa18.68■□□□□ 0.58
PNKP-224ENST00000631020 USP24Q9UPU5 2620 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 NPIPB15A6NHN6 443 aaPredicted RBP18.67■□□□□ 0.58
PNKP-224ENST00000631020 E7EVH7 732 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 PSMD3O43242 534 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 SUN1O94901 812 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 ADCY8P40145 1251 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 SUOXP51687 545 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 EPHB1P54762 984 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 C21orf59P57076 290 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 TRIM69Q86WT6 500 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 BAHD1Q8TBE0 780 aaPredicted RBP18.67■□□□□ 0.58
PNKP-224ENST00000631020 TBL1YQ9BQ87 522 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 LRRC1Q9BTT6 524 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 LRRC40Q9H9A6 602 aa18.67■□□□□ 0.58
PNKP-224ENST00000631020 ARNT2Q9HBZ2 717 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms