RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 THAP5Q7Z6K1 395 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 COPS8Q99627 209 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 DAPK2Q9UIK4 370 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TRAPPC6AO75865 159 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 OTCP00480 354 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 MMP3P08254 477 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 SAGP10523 405 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ANPEPP15144 967 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 PPP2R2BQ00005 443 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CAP1Q01518 475 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 PYDC2Q56P42 97 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 NEPROQ6NW34 567 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC30A6Q6NXT4 461 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TMPRSS11BQ86T26 416 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 RBM18Q96H35 190 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 C9orf16Q9BUW7 83 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 EHD3Q9NZN3 535 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TRPS1Q9UHF7 1281 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 GLS2Q9UI32 602 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 OGDHLQ9ULD0 1010 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 IRS2Q9Y4H2 1338 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 B4DGG1 531 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 F8VZ95 297 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 LRATO95237 230 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 PSMB4P28070 264 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 MNDAP41218 407 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 GCNT7Q6ZNI0 430 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CDH24Q86UP0 819 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ZNF227Q86WZ6 799 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ZSCAN4Q8NAM6 433 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ACTL9Q8TC94 416 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TMEM125Q96AQ2 219 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 WDR24Q96S15 920 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 LGMNQ99538 433 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 EBNA1BP2Q99848 306 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 FAM192AQ9GZU8 254 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ABCG8Q9H221 673 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ITGB1BP2Q9UKP3 347 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ADGRB3O60242 1522 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CLUHO75153 1309 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TTC34A8MYJ7 566 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC31A1O15431 190 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC6A2P23975 617 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ATP5A1P25705 553 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 SCNN1AP37088 669 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 RPS6KA3P51812 740 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 KCNA10Q16322 511 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TTI2Q6NXR4 508 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TXNDC11Q6PKC3 985 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CCNI2Q6ZMN8 369 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 KIAA0319LQ8IZA0 1049 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CKAP2Q8WWK9 683 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ELMO3Q96BJ8 720 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ACTL7BQ9Y614 415 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ZNF879B4DU55 563 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 GSC2O15499 205 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ALDH4A1P30038 563 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 LRPAP1P30533 357 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 MECP2P51608 486 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CCR3P51677 355 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 PPP3R1P63098 170 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 MC1RQ01726 317 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ACAP1Q15027 740 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ZNF730Q6ZMV8 503 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 PTGR2Q8N8N7 351 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 EFHD2Q96C19 240 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ZIM3Q96PE6 472 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 FCRL4Q96PJ5 515 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 QKIQ96PU8 341 aaKnown RBP eCLIP6.43□□□□□ -1.382e-9■■■■■ 52.7
SRGAP1-207ENST00000631006 DNAJC28Q9NX36 388 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 PDP2Q9P2J9 529 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ZNF222Q9UK12 451 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 GLI2P10070 1586 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 LOC100506127A0A0U1RQW1 187 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TEX46H3BTG2 121 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 DDX3XO00571 662 aaKnown RBP eCLIP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TRAFD1O14545 582 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 SCAMP1O15126 338 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 B3GALT2O43825 422 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 USP12O75317 370 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 IL33O95760 270 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TNFP01375 233 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CORO1AP31146 461 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CLCN5P51795 746 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 RAB39AQ14964 217 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 KPNB1Q14974 876 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 NEDD8Q15843 81 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 HSDL1Q3SXM5 330 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ZCWPW2Q504Y3 356 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TCHHL1Q5QJ38 904 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TMC5Q6UXY8 1006 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 MSANTD1Q6ZTZ1 278 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 ADAMTSL2Q86TH1 951 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 DEPDC4Q8N2C3 294 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 UBE2J2Q8N2K1 259 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 SLC43A3Q8NBI5 491 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 CLP1Q92989 425 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 MYDGFQ969H8 173 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 TMEM134Q9H6X4 195 aa6.43□□□□□ -1.38
SRGAP1-207ENST00000631006 HES2Q9Y543 173 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms