RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 AGTP01019 485 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 AKT2P31751 481 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 ETV3P41162 512 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 GEMP55040 296 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 SGCGQ13326 291 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 IRF4Q15306 451 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 KIF19Q2TAC6 998 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 TPRG1LQ5T0D9 272 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 DENND5AQ6IQ26 1287 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 SYT10Q6XYQ8 523 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 TECPR1Q7Z6L1 1165 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 SPATS2Q86XZ4 545 aaKnown RBP14.33□□□□□ -0.12
CBWD3-217ENST00000621474 MFSD2AQ8NA29 543 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 OR13H1Q8NG92 308 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 OR2I1PQ8NGU4 316 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 IFT43Q96FT9 208 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 NUSAP1Q9BXS6 441 aaKnown RBP14.33□□□□□ -0.12
CBWD3-217ENST00000621474 HOMER3Q9NSC5 361 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 ANKRD6Q9Y2G4 727 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 AAR2Q9Y312 384 aaKnown RBP14.33□□□□□ -0.12
CBWD3-217ENST00000621474 SNX11Q9Y5W9 270 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 HS3ST3A1Q9Y663 406 aa14.33□□□□□ -0.12
CBWD3-217ENST00000621474 ZNF106Q9H2Y7 1883 aaKnown RBP14.33□□□□□ -0.12
CBWD3-217ENST00000621474 GOLGA8CPA6NN73 597 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 ZNF30P17039 623 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 CTSKP43235 329 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 STC1P52823 247 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 PFN3P60673 137 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 SPARCL1Q14515 664 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 STAT4Q14765 748 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 LRRC14Q15048 493 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 DENND2CQ68D51 928 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 KYAT3Q6YP21 454 aaKnown RBP14.32□□□□□ -0.12
CBWD3-217ENST00000621474 Q6ZVL8 140 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 LYSMD3Q7Z3D4 306 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 IQCHQ86VS3 1027 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 NDUFAF2Q8N183 169 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 TAB3Q8N5C8 712 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-217ENST00000621474 GPR161Q8N6U8 529 aaKnown RBP14.32□□□□□ -0.12
CBWD3-217ENST00000621474 PLA2G15Q8NCC3 412 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 FUBP1Q96AE4 644 aaKnown RBP14.32□□□□□ -0.12
CBWD3-217ENST00000621474 DTD2Q96FN9 168 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 CAPZA3Q96KX2 299 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 NAP1L3Q99457 506 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-217ENST00000621474 APOL2Q9BQE5 337 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 FICDQ9BVA6 458 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 FSD1LQ9BXM9 530 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 CAAP1Q9H8G2 361 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 ETNK1Q9HBU6 452 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 MAGEE1Q9HCI5 957 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 NEU2Q9Y3R4 380 aa14.32□□□□□ -0.12
CBWD3-217ENST00000621474 C1orf232A0A0U1RR37 186 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 K7ESM1 405 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 TLR4O00206 839 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 USP12O75317 370 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 SOD1P00441 154 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 HLA-DPA1P20036 260 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 NFKBIAP25963 317 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 RPL22P35268 128 aaKnown RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 COILP38432 576 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 NXPH1P58417 271 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 ARHGEF7Q14155 803 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 ACOX1Q15067 660 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 CCDC137Q6PK04 289 aaKnown RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 SLC25A41Q8N5S1 370 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 PDCD7Q8N8D1 485 aaKnown RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 MAGOHBQ96A72 148 aaKnown RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 C16orf45Q96MC5 204 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 EDEM2Q9BV94 578 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 IL21RQ9HBE5 538 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 ARNT2Q9HBZ2 717 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 PNMA8BQ9ULN7 279 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 SHOC2Q9UQ13 582 aa14.31□□□□□ -0.12
CBWD3-217ENST00000621474 ARID1BQ8NFD5 2236 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-217ENST00000621474 A6NNZ2 444 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 PHF2O75151 1096 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 AP2A1O95782 977 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 THEGLP0DJG4 465 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 OVGP1Q12889 678 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 SEMA5AQ13591 1074 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 TEAD4Q15561 434 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 AASDHQ4L235 1098 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-217ENST00000621474 ESRP1Q6NXG1 681 aaKnown RBP14.3□□□□□ -0.12
CBWD3-217ENST00000621474 Q6ZSR6 202 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 TMC3Q7Z5M5 1100 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 CCDC89Q8N998 374 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 ATL2Q8NHH9 583 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 NUS1Q96E22 293 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 ZFYVE1Q9HBF4 777 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 CD84Q9UIB8 345 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 ZNF711Q9Y462 761 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 FPGTO14772 594 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 FOXD2O60548 495 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-217ENST00000621474 PCCBP05166 539 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 FGF1P05230 155 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 TRIM23P36406 574 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 PRPSAP1Q14558 356 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 INPP5AQ14642 412 aa14.3□□□□□ -0.12
CBWD3-217ENST00000621474 HLA-BQ31612 363 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms