RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 GTPBP1O00178 669 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 LEFTY2O00292 366 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 NR5A2O00482 541 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 RIPK2O43353 540 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 ULK1O75385 1050 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CDK14O94921 469 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 STBD1O95210 358 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CSKP41240 450 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 POM121L1PQ3SYA9 428 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 PACS1Q6VY07 963 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 KDM7AQ6ZMT4 941 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 TMC8Q8IU68 726 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 RHBGQ9H310 441 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 TAGLN3Q9UI15 199 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 POLR1DQ9Y2S0 133 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 SOBPA7XYQ1 873 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 WWP2O00308 870 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 ENTPD5O75356 428 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 LBPP18428 481 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 TAF13Q15543 124 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 FAM98BQ52LJ0 330 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 FBXW10Q5XX13 1052 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 ABHD13Q7L211 337 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CFAP52Q8N1V2 620 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CNDP1Q96KN2 507 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 SH3GL3Q99963 347 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 ACTL7BQ9Y614 415 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CAPN6Q9Y6Q1 641 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 AP5Z1O43299 807 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CTSAP10619 480 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CSF2RAP15509 400 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 DLG2Q15700 870 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 KIAA0408Q6ZU52 694 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 C16orf62Q7Z3J2 963 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 DCAKDQ8WVC6 231 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 TMBIM4Q9HC24 238 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 BPIFA1Q9NP55 256 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 RPS6KA6Q9UK32 745 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 FAM237BA0A1B0GVD1 139 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 MTMR11A4FU01 709 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CCT8P50990 548 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 IRX1P78414 480 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 FRG1Q14331 258 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 SF1Q15637 639 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 COLEC12Q5KU26 742 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 GPRIN3Q6ZVF9 776 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 GRASPQ7Z6J2 395 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 VMP1Q96GC9 406 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 KLHL32Q96NJ5 620 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 CEP41Q9BYV8 373 aa9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 DDX60Q8IY21 1712 aaKnown RBP9.74□□□□□ -0.85
TNFRSF9-204ENST00000615230 OR5K4A6NMS3 321 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 KCNJ13O60928 360 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 CBSLP0DN79 551 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 CBSP35520 551 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 NSG1P42857 185 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 RPS7P62081 194 aaKnown RBP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 BIKQ13323 160 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 MAGED4Q96JG8 741 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 ARHGAP9Q9BRR9 750 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 SLC25A23Q9BV35 468 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 PEX12O00623 359 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 WDR47O94967 919 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 PECAM1P16284 738 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 RPL17P18621 184 aaKnown RBP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 WASP42768 502 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 PTGER3P43115 390 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 SQLEQ14534 574 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 MRPL10Q7Z7H8 261 aaKnown RBP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 UNC5BQ8IZJ1 945 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 TEX9Q8N6V9 391 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 SUV39H2Q9H5I1 410 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 CRTAC1Q9NQ79 661 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 HSFX1Q9UBD0 423 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 ADAM30Q9UKF2 790 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 ADAMTS5Q9UNA0 930 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 SORCS3Q9UPU3 1222 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 RGPD2P0DJD1 1756 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 PAPPAQ13219 1627 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 BIRC5O15392 142 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 PKMP14618 531 aaKnown RBP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 DRD1P21728 446 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 HOXC12P31275 282 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 MLLT3P42568 568 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 NUDT2P50583 147 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 STX4Q12846 297 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 SNX20Q7Z614 316 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 NIPA2Q8N8Q9 360 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 HMCESQ96FZ2 354 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 KLHL5Q96PQ7 755 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 KCNS3Q9BQ31 491 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 IGSF9Q9P2J2 1179 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 B3GALT2O43825 422 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 ALBP02768 609 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 CSTF2P33240 577 aaKnown RBP eCLIP9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 SOWAHAQ2M3V2 549 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 PTPN20Q4JDL3 420 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 HID1Q8IV36 788 aa9.73□□□□□ -0.85
TNFRSF9-204ENST00000615230 ARID3BQ8IVW6 561 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms