RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, humanhuman

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-222ENST00000613508 MAFKO60675 156 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 HEXIM1O94992 359 aaKnown RBP11.14□□□□□ -0.63
CBWD1-222ENST00000613508 CEACAM5P06731 702 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 NFKBIAP25963 317 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 IL1R2P27930 398 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 VIPR1P32241 457 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 ZNF235Q14590 738 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 NR1D2Q14995 579 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 ACOX1Q15067 660 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 TCEA2Q15560 299 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 CNGA3Q16281 694 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 ANO6Q4KMQ2 910 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 FILIP1LQ4L180 1135 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 SPECC1LQ69YQ0 1117 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 FOXR1Q6PIV2 292 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 TMCO3Q6UWJ1 677 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 CCDC81Q6ZN84 652 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 LRRC49Q8IUZ0 686 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 SLITRK4Q8IW52 837 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 TP53INP2Q8IXH6 220 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 PELI3Q8N2H9 469 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 PGBD5Q8N414 524 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 NIPA2Q8N8Q9 360 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 KIAA1524Q8TCG1 905 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 TEKT4Q8WW24 435 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 ZNF653Q96CK0 615 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 NUS1Q96E22 293 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 DTD2Q96FN9 168 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 SCRN2Q96FV2 425 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 MED8Q96G25 268 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 CSPG4P5Q96PW8 444 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-222ENST00000613508 SYNDIG1Q9H7V2 258 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 NOD2Q9HC29 1040 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 CYP4F12Q9HCS2 524 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 MRPL40Q9NQ50 206 aaKnown RBP11.14□□□□□ -0.63
CBWD1-222ENST00000613508 PHPT1Q9NRX4 125 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-222ENST00000613508 LRIT1Q9P2V4 623 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 PHTF1Q9UMS5 762 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 PPIL1Q9Y3C6 166 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 PCDHGC4Q9Y5F7 938 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 RNF215Q9Y6U7 377 aa11.14□□□□□ -0.63
CBWD1-222ENST00000613508 ANKRD36A6QL64 1941 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 SMTNL1A8MU46 457 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 PGLSO95336 258 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 CPP00450 1065 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 FUCA1P04066 466 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 CCNB1P14635 433 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 ARL4AP40617 200 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 CDH6P55285 790 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 B4GALNT1Q00973 533 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 DPTQ07507 201 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 KLHL30Q0D2K2 578 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 SQSTM1Q13501 440 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 ARHGEF7Q14155 803 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 PIGHQ14442 188 aaPredicted RBP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 NR1I3Q14994 352 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 XKR5Q6UX68 686 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 NRROSQ86YC3 692 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 TEX26Q8N6G2 289 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 PAF1Q8N7H5 531 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 Q8N9G6 341 aaPredicted RBP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 CCL4L1Q8NHW4 92 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 FAM71BQ8TC56 605 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 SYN2Q92777 582 aaPredicted RBP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 SCARF2Q96GP6 870 aaPredicted RBP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 CMKLR1Q99788 373 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 DPEP2Q9H4A9 486 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 SPATS2LQ9NUQ6 558 aaKnown RBP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 ETNK2Q9NVF9 386 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 RCOR3Q9P2K3 495 aaPredicted RBP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 SLC17A4Q9Y2C5 497 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 LOXL2Q9Y4K0 774 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 BZW2Q9Y6E2 419 aaKnown RBP11.13□□□□□ -0.63
CBWD1-222ENST00000613508 BSNQ9UPA5 3926 aa11.13□□□□□ -0.63
CBWD1-222ENST00000613508 UBR5O95071 2799 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-222ENST00000613508 NPIPB15A6NHN6 443 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-222ENST00000613508 A8MX80 341 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 B4DGG1 531 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 B8ZZF3 427 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-222ENST00000613508 ZW10O43264 779 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 B4GAT1O43505 415 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 CPNE6O95741 557 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 ITGB2P05107 769 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 FGF1P05230 155 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 JMJD7P0C870 316 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 RARAP10276 462 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 LIPCP11150 499 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 CYP2A6P11509 494 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-222ENST00000613508 TCF4P15884 667 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 LHCGRP22888 699 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 AMPD1P23109 780 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 CD82P27701 267 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 SERPINB6P35237 376 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 ETV3P41162 512 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 MMP13P45452 471 aa11.12□□□□□ -0.63
CBWD1-222ENST00000613508 GPR3P46089 330 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms