RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TBC1D29Q9UFV1 150 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 GPR34Q9UPC5 381 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 ERVK-11Q9UQG0 969 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 MTMR6Q9Y217 621 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 PAM16Q9Y3D7 125 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 INSL5Q9Y5Q6 135 aa4.39□□□□□ -1.71
SMCHD1-213ENST00000609587 CD8B2A6NJW9 211 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 OR6C75A6NL08 312 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 VILLO15195 856 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 SLC25A12O75746 678 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 SOX30O94993 753 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 LDHCP07864 332 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 SCP2P22307 547 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 GPTP24298 496 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 HOXD13P35453 343 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 KCNJ4P48050 445 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 NUDT6P53370 316 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 LINC00205P59089 165 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 KRT24Q2M2I5 525 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 C2orf68Q2NKX9 166 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 MMEL1Q495T6 779 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 DAB2IPQ5VWQ8 1189 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 SHFQ7M4L6 423 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 WDR63Q8IWG1 891 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 RPAP2Q8IXW5 612 aaPredicted RBP4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 AGBL3Q8NEM8 1001 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 ARHGEF26Q96DR7 871 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 NCAPGQ9BPX3 1015 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 FAM110AQ9BQ89 295 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 SF3B5Q9BWJ5 86 aaKnown RBP4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 IFIH1Q9BYX4 1025 aaKnown RBP4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 DCLK3Q9C098 648 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 RANGRFQ9HD47 186 aaPredicted RBP4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 GPR108Q9NPR9 543 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 HIF1ANQ9NWT6 349 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 NSMCE4AQ9NXX6 385 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 ZNF215Q9UL58 517 aaPredicted RBP4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 PTGDR2Q9Y5Y4 395 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 MAU2Q9Y6X3 613 aa4.38□□□□□ -1.71
SMCHD1-213ENST00000609587 FRMD3A2A2Y4 597 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 AKR1B15C9JRZ8 316 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 INAFM1C9JVW0 142 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 K7ENM7 598 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 TIMM23O14925 209 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 NDUFS3O75489 264 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 VNN2O95498 520 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 RPL3P39023 403 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 MC1RQ01726 317 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 CREB5Q02930 508 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 CUL4AQ13619 759 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 GKAP1Q5VSY0 366 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 TYW3Q6IPR3 259 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 PLEKHA7Q6IQ23 1121 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 MTSS1LQ765P7 747 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 TICAM1Q8IUC6 712 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 ASB5Q8WWX0 329 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 SGCDQ92629 289 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 ZKSCAN4Q969J2 545 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 HARBI1Q96MB7 349 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 NDST4Q9H3R1 872 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 SMARCAD1Q9H4L7 1026 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 SLC28A3Q9HAS3 691 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 MKKSQ9NPJ1 570 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 ADD3Q9UEY8 706 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 RCOR1Q9UKL0 485 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 STON1Q9Y6Q2 735 aa4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 RSF1Q96T23 1441 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-213ENST00000609587 IGHV4-28A0A0C4DH34 117 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 DYTNA2CJ06 578 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 FAM90A8PA6NJQ4 464 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 A8MZ25 164 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 BTBD18B2RXH4 712 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 J3KR12 359 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 WNT9BO14905 357 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 SCAMP1O15126 338 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 HCRTR2O43614 444 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 CYC1P08574 325 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 FAM90A13PP0C7W8 464 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 FAM90A24PP0C7X0 464 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 SNHG28P0DPA3 235 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 MCM3P25205 808 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 CDC25AP30304 524 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 PSMB10P40306 273 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 UBA7P41226 1012 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 GARSP41250 739 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 PIK3CAP42336 1068 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 PGGT1BP53609 377 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 CDH8P55286 799 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 WTAPQ15007 396 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 ZSCAN23Q3MJ62 389 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 RILPL1Q5EBL4 403 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 ANKRD54Q6NXT1 300 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 GLDNQ6ZMI3 551 aaPredicted RBP4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 C9orf47Q6ZRZ4 202 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 CHST9Q7L1S5 443 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 ZDHHC17Q8IUH5 632 aa4.36□□□□□ -1.71
SMCHD1-213ENST00000609587 TEX11Q8IYF3 940 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms