RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, human

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-205	ENST00000603651	LINC01547	P58512	204 aa	Predicted RBP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	SEC61B	P60468	96 aa	Known RBP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	SORD	Q00796	357 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	CCDC96	Q2M329	555 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	SGO1	Q5FBB7	561 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	KCNT1	Q5JUK3	1230 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	HIST2H2BC	Q6DN03	193 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	HIST2H2BD	Q6DRA6	164 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	TMEM81	Q6P7N7	255 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	ZNF34	Q8IZ26	560 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	ZBTB2	Q8N680	514 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	CDCA5	Q96FF9	252 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	ZNF583	Q96ND8	569 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	INTS2	Q9H0H0	1204 aa	Known RBP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	ESRP2	Q9H6T0	727 aa	Known RBP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	RIC8A	Q9NPQ8	531 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	CNOT7	Q9UIV1	285 aa	Known RBP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	FBXO9	Q9UK97	447 aa	Predicted RBP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	FAF1	Q9UNN5	650 aa	Predicted RBP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	COMMD10	Q9Y6G5	202 aa		4.97	□□□□□ -1.61
TUBE1-205	ENST00000603651	TEX13C	A0A0J9YWL9	993 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	ASPDH	A6ND91	283 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	TMEM202	A6NGA9	273 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	HEXA	P06865	529 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	ANOS1	P23352	680 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	ATP12A	P54707	1039 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	C2orf68	Q2NKX9	166 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	GRAMD1B	Q3KR37	738 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	STXBP5	Q5T5C0	1151 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	MAP3K21	Q5TCX8	1036 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	GFRAL	Q6UXV0	394 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	TMEM219	Q86XT9	240 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	TMTC1	Q8IUR5	882 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	BEST2	Q8NFU1	509 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	C20orf141	Q9NUB4	165 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	AMDHD2	Q9Y303	409 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	STON1	Q9Y6Q2	735 aa		4.96	□□□□□ -1.62
TUBE1-205	ENST00000603651	TEX22	C9J3V5	150 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	SNAP23	O00161	211 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	APOH	P02749	345 aa	Predicted RBP	4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	AMBP	P02760	352 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	AGA	P20933	346 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	CLCNKA	P51800	687 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	ISL1	P61371	349 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	UBE3A	Q05086	875 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	NKAP	Q8N5F7	415 aa	Known RBP	4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	METTL27	Q8N6F8	245 aa	Predicted RBP	4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	C11orf65	Q8NCR3	313 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	SLC24A4	Q8NFF2	622 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	OR2AK2	Q8NG84	335 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	KIF1BP	Q96EK5	621 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	ALG14	Q96F25	216 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	MTERF1	Q99551	399 aa	Known RBP	4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	PLEKHA5	Q9HAU0	1116 aa		4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651	GREB1L	Q9C091	1923 aa	Predicted RBP	4.95	□□□□□ -1.62
TUBE1-205	ENST00000603651		A0A1W2PS18	150 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	FAM72C	H0Y354	149 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	PRSS1	P07477	247 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	BDKRB2	P30411	391 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	SHMT1	P34896	483 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	GGT5	P36269	586 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	HAL	P42357	657 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	PDE1B	Q01064	536 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	SREBF2	Q12772	1141 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	ZNF766	Q5HY98	468 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	FAM72A	Q5TYM5	149 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	FAM72D	Q6L9T8	149 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	KCTD18	Q6PI47	426 aa	Predicted RBP	4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	LDHAL6A	Q6ZMR3	332 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	KCTD8	Q6ZWB6	473 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	LINGO2	Q7L985	606 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	FAM72B	Q86X60	149 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	KMT5C	Q86Y97	462 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	WDR63	Q8IWG1	891 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	CHERP	Q8IWX8	916 aa	Known RBP	4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	HUS1B	Q8NHY5	278 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	HMGCLL1	Q8TB92	370 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	ABTB1	Q969K4	478 aa	Predicted RBP	4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	DUX3	Q96PT4	197 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	PCYT2	Q99447	389 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	KCNN2	Q9H2S1	579 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	PPP1R3E	Q9H7J1	279 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	PPCS	Q9HAB8	311 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	MCM9	Q9NXL9	1143 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	DDX43	Q9NXZ2	648 aa	Known RBP	4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	HSPB7	Q9UBY9	170 aa		4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.94	□□□□□ -1.62
TUBE1-205	ENST00000603651	EIF3F	O00303	357 aa	Predicted RBP	4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	TF	P02787	698 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	FGF5	P12034	268 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	KRT10	P13645	584 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	MYOD1	P15172	320 aa		4.93	□□□□□ -1.62
TUBE1-205	ENST00000603651	GM2A	P17900	193 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms