RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 RPL21P46778 160 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 PSMD8P48556 350 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 VPS41P49754 854 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 FAM193AP78312 1265 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 MSLNQ13421 630 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 MAP7D1Q3KQU3 841 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 UAP1L1Q3KQV9 507 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 USP39Q53GS9 565 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 FAM182AQ5T1J6 154 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 CFAP58Q5T655 872 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 PIP5KL1Q5T9C9 394 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 FAXCQ5TGI0 409 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 AGBL4Q5VU57 503 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 LRRC8BQ6P9F7 803 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 PPP1R21Q6ZMI0 780 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 PARS2Q7L3T8 475 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 ZSWIM9Q86XI8 627 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 TMEFF1Q8IYR6 380 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 AADATQ8N5Z0 425 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 LRRN4CLQ8ND94 238 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 IPMKQ8NFU5 416 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 FOXP3Q9BZS1 431 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 TRABDQ9H4I3 376 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 MAGEE1Q9HCI5 957 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 XAB2Q9HCS7 855 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 GDF3Q9NR23 364 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 FAM114A2Q9NRY5 505 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 UBP1Q9NZI7 540 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 HACD3Q9P035 362 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 DMGDHQ9UI17 866 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 CHKBQ9Y259 395 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 KNL1Q8NG31 2342 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 HELZ2Q9BYK8 2649 aaKnown RBP11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 SPAARA0A1B0GVQ0 90 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 CAPN8A6NHC0 703 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 PPFIA2O75334 1257 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 TMEM63AO94886 807 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 CPP00450 1065 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 AGTP01019 485 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 ENGP17813 658 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 LMAN1P49257 510 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 ELP6Q0PNE2 266 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 CNTN1Q12860 1018 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 CDH17Q12864 832 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 CALCOCO2Q13137 446 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 CUL1Q13616 776 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 QPCTQ16769 361 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 TRIM61Q5EBN2 209 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 SIRPB2Q5JXA9 342 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 PEAR1Q5VY43 1037 aaPredicted RBP11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 IZUMO3Q5VZ72 239 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 NEK5Q6P3R8 708 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 FBXL19Q6PCT2 694 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 USP45Q70EL2 814 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 ZNF534Q76KX8 674 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 PIP4P1Q86T03 277 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 HMGB4Q8WW32 186 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 ART4Q93070 314 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 FICDQ9BVA6 458 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 SGK2Q9HBY8 427 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 FBXL12Q9NXK8 326 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 GRHL1Q9NZI5 618 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 NCKAP1Q9Y2A7 1128 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 SNX24Q9Y343 169 aa11.68□□□□□ -0.54
CHMP2A-207ENST00000600804 LRRK1Q38SD2 2015 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 TCRBV7S3A2A0A539 114 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 PSMD11O00231 422 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 SPINT1O43278 529 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 TSPAN6O43657 245 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 PLRG1O43660 514 aaKnown RBP11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 TUBBP07437 444 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 ACADMP11310 421 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 CYP2A6P11509 494 aaPredicted RBP11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 ZNF30P17039 623 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 ITPKAP23677 461 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 PSMA3P25788 255 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 TNFRSF8P28908 595 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 MMP12P39900 470 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 NPY2RP49146 381 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 TPMTP51580 245 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 ITGA8P53708 1063 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 EPHB1P54762 984 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 SLC7A5Q01650 507 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 LAMB3Q13751 1172 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 PCSK7Q16549 785 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 CDKN3Q16667 212 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 TMEM52BQ4KMG9 183 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 ANKRD22Q5VYY1 191 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 ERAP2Q6P179 960 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 KIAA1324Q6UXG2 1013 aaKnown RBP11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 DPPA4Q7L190 304 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 TTC7BQ86TV6 843 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 CAND1Q86VP6 1230 aaKnown RBP11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 IFT20Q8IY31 132 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 CBARPQ8N350 705 aaPredicted RBP11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 HDDC3Q8N4P3 179 aa11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 ZCCHC9Q8N567 271 aaKnown RBP11.67□□□□□ -0.54
CHMP2A-207ENST00000600804 LPCAT1Q8NF37 534 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms