RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 CASC3O15234 703 aaKnown RBP18.77■□□□□ 0.6
PNKP-213ENST00000599543 KLK10O43240 276 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 TMEM253P0C7T8 217 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 RARAP10276 462 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 SERPINB6P35237 376 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 KCTD16Q68DU8 428 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 TXNRD3NBQ6F5E7 133 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 RAD9BQ6WBX8 426 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 TAF8Q7Z7C8 310 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 OR1E3Q8WZA6 343 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 SLC39A7Q92504 469 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 SPOCK2Q92563 424 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 NUS1Q96E22 293 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 NSMCE3Q96MG7 304 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 GFM1Q96RP9 751 aaKnown RBP18.77■□□□□ 0.6
PNKP-213ENST00000599543 DPH1Q9BZG8 443 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 FGF22Q9HCT0 170 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 ETNK2Q9NVF9 386 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 RABGEF1Q9UJ41 708 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 PCDHGC4Q9Y5F7 938 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 HELZ2Q9BYK8 2649 aaKnown RBP18.76■□□□□ 0.59
PNKP-213ENST00000599543 CCDC187A0A096LP49 1063 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 PDE2AO00408 941 aaPredicted RBP18.76■□□□□ 0.59
PNKP-213ENST00000599543 HTRA2O43464 458 aaPredicted RBP18.76■□□□□ 0.59
PNKP-213ENST00000599543 MAFKO60675 156 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 PEX11BO96011 259 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 CPP00450 1065 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 RPLP0P05388 317 aaKnown RBP18.76■□□□□ 0.59
PNKP-213ENST00000599543 HOXC4P09017 264 aaPredicted RBP18.76■□□□□ 0.59
PNKP-213ENST00000599543 GJC1P36383 396 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 TRIM23P36406 574 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 SSR1P43307 286 aaKnown RBP18.76■□□□□ 0.59
PNKP-213ENST00000599543 MAGEA1P43355 309 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 CDH6P55285 790 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 DENND2CQ68D51 928 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 PNCKQ6P2M8 343 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 NIPA2Q8N8Q9 360 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 TEKT4Q8WW24 435 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 CCDC97Q96F63 343 aaPredicted RBP18.76■□□□□ 0.59
PNKP-213ENST00000599543 NUDCD1Q96RS6 583 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 MGME1Q9BQP7 344 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 GRPEL1Q9HAV7 217 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 MRPL40Q9NQ50 206 aaKnown RBP18.76■□□□□ 0.59
PNKP-213ENST00000599543 IP6K2Q9UHH9 426 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 MOSPD1Q9UJG1 213 aa18.76■□□□□ 0.59
PNKP-213ENST00000599543 PMS2P1A4D2B8 440 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 GOLGA6L3A6NEY3 463 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 D6RAR5 112 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 TNFRSF10CO14798 259 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 TNFSF15O95150 251 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 GM2AP17900 193 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 CR2P20023 1033 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 MLLT3P42568 568 aaPredicted RBP18.75■□□□□ 0.59
PNKP-213ENST00000599543 MMP13P45452 471 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 SLC25A11Q02978 314 aaKnown RBP18.75■□□□□ 0.59
PNKP-213ENST00000599543 KRT81Q14533 505 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 CNGA3Q16281 694 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 RALGPS1Q5JS13 557 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 TMEM139Q8IV31 216 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 PGBD5Q8N414 524 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 LSM14AQ8ND56 463 aaKnown RBP18.75■□□□□ 0.59
PNKP-213ENST00000599543 ACRBPQ8NEB7 543 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 FAM46DQ8NEK8 389 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 SLC35G2Q8TBE7 412 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 LIN37Q96GY3 246 aaPredicted RBP18.75■□□□□ 0.59
PNKP-213ENST00000599543 PRR11Q96HE9 360 aaPredicted RBP18.75■□□□□ 0.59
PNKP-213ENST00000599543 COQ10AQ96MF6 247 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 LGR4Q9BXB1 951 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 STRADBQ9C0K7 418 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 NOD2Q9HC29 1040 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 CPNE5Q9HCH3 593 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 PCDH18Q9HCL0 1135 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 EPB41L5Q9HCM4 733 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 CYP4F12Q9HCS2 524 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 AHCTF1Q8WYP5 2266 aa18.75■□□□□ 0.59
PNKP-213ENST00000599543 PRSS38A1L453 326 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 CDRT15L2A8MXV6 281 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 B4DGG1 531 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 TMX2-CTNND1H3BSU7 103 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 PRB1P04280 392 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 ITGA2BP08514 1039 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 CYP2A6P11509 494 aaPredicted RBP18.74■□□□□ 0.59
PNKP-213ENST00000599543 MYCLP1P12525 358 aaPredicted RBP18.74■□□□□ 0.59
PNKP-213ENST00000599543 GLB1P16278 677 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 FECHP22830 423 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 VIPR1P32241 457 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 CYLC1P35663 651 aaPredicted RBP18.74■□□□□ 0.59
PNKP-213ENST00000599543 MAXP61244 160 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 CCL7P80098 99 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 EIF3IQ13347 325 aaKnown RBP18.74■□□□□ 0.59
PNKP-213ENST00000599543 MESDQ14696 234 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 ARHGAP40Q5TG30 622 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 MARC1Q5VT66 337 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 B3GNT8Q7Z7M8 397 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 GPR156Q8NFN8 814 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 BAG1Q99933 345 aaPredicted RBP18.74■□□□□ 0.59
PNKP-213ENST00000599543 FOXP3Q9BZS1 431 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 TMEM168Q9H0V1 697 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 DPEP2Q9H4A9 486 aa18.74■□□□□ 0.59
PNKP-213ENST00000599543 PHPT1Q9NRX4 125 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms