RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 CD84Q9UIB8 345 aa11.16□□□□□ -0.62
VRK3-210ENST00000596121 SPO11Q9Y5K1 396 aa11.16□□□□□ -0.62
VRK3-210ENST00000596121 TDRD6O60522 2096 aaKnown RBP11.16□□□□□ -0.62
VRK3-210ENST00000596121 CAPN8A6NHC0 703 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 ANKRD66B4E2M5 251 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 SCAMP1O15126 338 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 FLRT2O43155 660 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 PMPCBO75439 489 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 PIAS2O75928 621 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 TJP3O95049 919 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 SOD1P00441 154 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 FUCA1P04066 466 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 CSF2P04141 144 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 ITGAVP06756 1048 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 CELA2BP08218 269 aaPredicted RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 ADRB1P08588 477 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 ATXN1LP0C7T5 689 aaKnown RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 PIRTP0C851 137 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 RBP3P10745 1247 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 NME1P15531 152 aaKnown RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 DGKAP23743 735 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 TRIM23P36406 574 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 CHRNA4P43681 627 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 ARRB1P49407 418 aaPredicted RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 STC1P52823 247 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 EPHB1P54762 984 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 RPL26P61254 145 aaKnown RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 YPEL5P62699 121 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 SIM1P81133 766 aaPredicted RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 CDK18Q07002 472 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 OLIG2Q13516 323 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 SUZ12Q15022 739 aaKnown RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 CCDC181Q5TID7 509 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 PNCKQ6P2M8 343 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 USP45Q70EL2 814 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 PID1Q7Z2X4 250 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 DCP2Q8IU60 420 aaKnown RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 OXR1Q8N573 874 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 PNPLA1Q8N8W4 532 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 SLC35B2Q8TB61 432 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 SCAMP4Q969E2 229 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 NUS1Q96E22 293 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 MRGPRX2Q96LB1 330 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 FCRL5Q96RD9 977 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 LYSMD1Q96S90 227 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 MLPHQ9BV36 600 aaPredicted RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 C1QTNF7Q9BXJ2 289 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 ABCG8Q9H221 673 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 SLC32A1Q9H598 525 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 KLHL8Q9P2G9 620 aaPredicted RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 RPL26L1Q9UNX3 145 aaKnown RBP11.15□□□□□ -0.62
VRK3-210ENST00000596121 WASF3Q9UPY6 502 aa11.15□□□□□ -0.62
VRK3-210ENST00000596121 LOC285095A0A1B0GVY8 99 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 TMEM202A6NGA9 273 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 PSMD11O00231 422 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 AURKAO14965 403 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 KCNN4O15554 427 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 MTSS1O43312 755 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 GCATO75600 419 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 MYF5P13349 255 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 GRK6P43250 576 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 GDF10P55107 478 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 WNT3AP56704 352 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 MTM1Q13496 603 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 C1orf61Q13536 156 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 ARHGEF7Q14155 803 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 NFATC4Q14934 902 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 RPS6KA1Q15418 735 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 SIX1Q15475 284 aaPredicted RBP11.14□□□□□ -0.63
VRK3-210ENST00000596121 SLC14A2Q15849 920 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 ALG11Q2TAA5 492 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 ESRP1Q6NXG1 681 aaKnown RBP11.14□□□□□ -0.63
VRK3-210ENST00000596121 DARS2Q6PI48 645 aaKnown RBP11.14□□□□□ -0.63
VRK3-210ENST00000596121 GLRX5Q86SX6 157 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 PARGQ86W56 976 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 SLC13A5Q86YT5 568 aaPredicted RBP11.14□□□□□ -0.63
VRK3-210ENST00000596121 CDKL3Q8IVW4 592 aaPredicted RBP11.14□□□□□ -0.63
VRK3-210ENST00000596121 CCDC110Q8TBZ0 833 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 ATG4AQ8WYN0 398 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 TSACCQ96A04 125 aaPredicted RBP11.14□□□□□ -0.63
VRK3-210ENST00000596121 IFT43Q96FT9 208 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 CLPBQ9H078 707 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 MRPL40Q9NQ50 206 aaKnown RBP11.14□□□□□ -0.63
VRK3-210ENST00000596121 FAM153AQ9UHL3 310 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 DNPEPQ9ULA0 475 aa11.14□□□□□ -0.63
VRK3-210ENST00000596121 LY6G6EA0A0G2JKS1 128 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 YKT6O15498 198 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 FFAR2O15552 330 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 SIGLEC6O43699 453 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 DKK1O94907 266 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 NDST3O95803 873 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 AGTP01019 485 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 FTH1P19P0C7X4 201 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 JUNDP17535 347 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 SPINK2P20155 84 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 PSMB4P28070 264 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 PMLP29590 882 aa11.13□□□□□ -0.63
VRK3-210ENST00000596121 CETN2P41208 172 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms