RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 GOLGA6DP0CG33 693 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 THEGLP0DJG4 465 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 ZNF30P17039 623 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 GM2AP17900 193 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 HLA-DPA1P20036 260 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 CTSKP43235 329 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 NXPH1P58417 271 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 ETF1P62495 437 aaKnown RBP14.37□□□□□ -0.11
LIG1-208ENST00000595758 ARHGAP8P85298 464 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 PTSQ03393 145 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 IRF4Q15306 451 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 SIRPB2Q5JXA9 342 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
LIG1-208ENST00000595758 Q6ZSR6 202 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 TAB3Q8N5C8 712 aaPredicted RBP14.37□□□□□ -0.11
LIG1-208ENST00000595758 SLC25A41Q8N5S1 370 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 MAGOHBQ96A72 148 aaKnown RBP14.37□□□□□ -0.11
LIG1-208ENST00000595758 LRRC45Q96CN5 670 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
LIG1-208ENST00000595758 FICDQ9BVA6 458 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 MAGEE1Q9HCI5 957 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 MBNL1Q9NR56 388 aaKnown RBP14.37□□□□□ -0.11
LIG1-208ENST00000595758 KCTD5Q9NXV2 234 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 GOLGA6AQ9NYA3 693 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 USP34Q70CQ2 3546 aa14.37□□□□□ -0.11
LIG1-208ENST00000595758 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.36□□□□□ -0.11
LIG1-208ENST00000595758 FANCGO15287 622 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 PSMD3O43242 534 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 ETS1P14921 441 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 CASQ1P31415 396 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 ADRA1AP35348 466 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 IGFALSP35858 605 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 ETV3P41162 512 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 CHRNA4P43681 627 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 RABIFP47224 123 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 STC1P52823 247 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 SLC1A5Q15758 541 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 CDKN3Q16667 212 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 HLA-BQ31612 363 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 FAXCQ5TGI0 409 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 STPG1Q5TH74 334 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 RANBP10Q6VN20 620 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 Q6ZVL8 140 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 PTAR1Q7Z6K3 402 aaPredicted RBP14.36□□□□□ -0.11
LIG1-208ENST00000595758 TECPR1Q7Z6L1 1165 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 PRUNE1Q86TP1 453 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 DCP2Q8IU60 420 aaKnown RBP14.36□□□□□ -0.11
LIG1-208ENST00000595758 KLHDC8BQ8IXV7 354 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 MINDY1Q8N5J2 469 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 OR13H1Q8NG92 308 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 OR2I1PQ8NGU4 316 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 ATL2Q8NHH9 583 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 CCHCR1Q8TD31 782 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 NUS1Q96E22 293 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 DTD2Q96FN9 168 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 CAPZA3Q96KX2 299 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 TMEM9BQ9NQ34 198 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 GDF3Q9NR23 364 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 PAK5Q9P286 719 aa14.36□□□□□ -0.11
LIG1-208ENST00000595758 CDX4O14627 284 aaPredicted RBP14.35□□□□□ -0.11
LIG1-208ENST00000595758 TOR1BO14657 336 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 CER1O95813 267 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 PCCBP05166 539 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 FGF1P05230 155 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 C1SP09871 688 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 ZSCAN5DPP0CG00 497 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 RPL22P35268 128 aaKnown RBP14.35□□□□□ -0.11
LIG1-208ENST00000595758 FDFT1P37268 417 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 PFN3P60673 137 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 SPARCL1Q14515 664 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 INPP5AQ14642 412 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 CYP1B1Q16678 543 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 TTC27Q6P3X3 843 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 SYT10Q6XYQ8 523 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 KDM7AQ6ZMT4 941 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 RFLNAQ6ZTI6 216 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 LYSMD3Q7Z3D4 306 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 SPATS2Q86XZ4 545 aaKnown RBP14.35□□□□□ -0.11
LIG1-208ENST00000595758 CREG2Q8IUH2 290 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 GLIS1Q8NBF1 620 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 TBL1YQ9BQ87 522 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 APOL2Q9BQE5 337 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 GPR63Q9BZJ6 419 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 GAREM1Q9H706 876 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 LRRC40Q9H9A6 602 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 ZFYVE1Q9HBF4 777 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 ETNK1Q9HBU6 452 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 SHOC2Q9UQ13 582 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 ZNF711Q9Y462 761 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 SPO11Q9Y5K1 396 aa14.35□□□□□ -0.11
LIG1-208ENST00000595758 PCDH15Q96QU1 1955 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 RGSL1A5PLK6 1076 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 C4orf47A7E2U8 309 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 DFNA5O60443 496 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 PHF2O75151 1096 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 USP12O75317 370 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 COILP38432 576 aaPredicted RBP14.34□□□□□ -0.11
LIG1-208ENST00000595758 THOP1P52888 689 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 YPEL5P62699 121 aa14.34□□□□□ -0.11
LIG1-208ENST00000595758 MTM1Q13496 603 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms