RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 GSDMCQ9BYG8 508 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 TRIM7Q9C029 511 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 HSD3B7Q9H2F3 369 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 SUDS3Q9H7L9 328 aaPredicted RBP22.68■■□□□ 1.22
SSBP4-203ENST00000593641 CWC15Q9P013 229 aaKnown RBP22.68■■□□□ 1.22
SSBP4-203ENST00000593641 AKAP7Q9P0M2 348 aaPredicted RBP22.68■■□□□ 1.22
SSBP4-203ENST00000593641 CNOT8Q9UFF9 292 aaKnown RBP22.68■■□□□ 1.22
SSBP4-203ENST00000593641 ZFC3H1O60293 1989 aaKnown RBP22.67■■□□□ 1.22
SSBP4-203ENST00000593641 LRRC53A6NM62 1247 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 H3BRJ5 948 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 ZW10O43264 779 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 EFSO43281 561 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 LRCH4O75427 683 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 CPP00450 1065 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 CCNB1P14635 433 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 VIPR1P32241 457 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 ARL4AP40617 200 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 MAPK10P53779 464 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 ILF3Q12906 894 aaKnown RBP eCLIP22.67■■□□□ 1.222e-11■■□□□ 11.9
SSBP4-203ENST00000593641 CNGA3Q16281 694 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 MANEAQ5SRI9 462 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 DENND2CQ68D51 928 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 CYP4V2Q6ZWL3 525 aaPredicted RBP22.67■■□□□ 1.22
SSBP4-203ENST00000593641 HEATR4Q86WZ0 1026 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 SLITRK4Q8IW52 837 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 PELI3Q8N2H9 469 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 AOPEPQ8N6M6 819 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 SPOCK2Q92563 424 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 ZNF653Q96CK0 615 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 COQ10AQ96MF6 247 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 ARHGAP9Q9BRR9 750 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 HAUS4Q9H6D7 363 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 PCDHB11Q9Y5F2 797 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 PCDHGC4Q9Y5F7 938 aa22.67■■□□□ 1.22
SSBP4-203ENST00000593641 PRAMEF33A0A0G2JMD5 474 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 GOLGA6CA6NDK9 693 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 GOLGA6BA6NDN3 693 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 RHPN2P1A8MT19 583 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 HTRA2O43464 458 aaPredicted RBP22.66■■□□□ 1.22
SSBP4-203ENST00000593641 SLC28A2O43868 658 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 PRAMEF10O60809 474 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 CPNE6O95741 557 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 FTLP02792 175 aaPredicted RBP22.66■■□□□ 1.22
SSBP4-203ENST00000593641 GOLGA6DP0CG33 693 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 CYP2A6P11509 494 aaPredicted RBP22.66■■□□□ 1.22
SSBP4-203ENST00000593641 GZMAP12544 262 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 BIRC2Q13490 618 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 TMCO3Q6UWJ1 677 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 PIM3Q86V86 326 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 TP53INP2Q8IXH6 220 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 GPBAR1Q8TDU6 330 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 ZDHHC1Q8WTX9 485 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 NSMCE1Q8WV22 266 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 TRIM11Q96F44 468 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 NUDCD1Q96RS6 583 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 MRPL47Q9HD33 250 aaKnown RBP22.66■■□□□ 1.22
SSBP4-203ENST00000593641 GOLGA6AQ9NYA3 693 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 BOD1L1Q8NFC6 3051 aa22.66■■□□□ 1.22
SSBP4-203ENST00000593641 TLN1Q9Y490 2541 aaKnown RBP22.65■■□□□ 1.22
SSBP4-203ENST00000593641 TTC24A2A3L6 582 aaPredicted RBP22.65■■□□□ 1.22
SSBP4-203ENST00000593641 HEXIM1O94992 359 aaKnown RBP22.65■■□□□ 1.22
SSBP4-203ENST00000593641 MAZP56270 477 aaKnown RBP22.65■■□□□ 1.22
SSBP4-203ENST00000593641 AMZ1Q400G9 498 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 TMEM164Q5U3C3 297 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 ZSCAN1Q8NBB4 408 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 USP7Q93009 1102 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 DTD2Q96FN9 168 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 NSMCE3Q96MG7 304 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 TEX101Q9BY14 249 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 NAT10Q9H0A0 1025 aaKnown RBP22.65■■□□□ 1.22
SSBP4-203ENST00000593641 RDH14Q9HBH5 336 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 TRNAU1APQ9NX07 287 aaKnown RBP22.65■■□□□ 1.22
SSBP4-203ENST00000593641 PHTF1Q9UMS5 762 aa22.65■■□□□ 1.22
SSBP4-203ENST00000593641 GOLGA6L22H0YM25 854 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 ITGB2P05107 769 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 MYBL1P10243 752 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 CD82P27701 267 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 PCK1P35558 622 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 ETV5P41161 510 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 GNPDA1P46926 289 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 CDK3Q00526 305 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 B4GALNT1Q00973 533 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 SRSF6Q13247 344 aaKnown RBP22.64■■□□□ 1.21
SSBP4-203ENST00000593641 PEX6Q13608 980 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 DPYSL2Q16555 572 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 SMTNL2Q2TAL5 461 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 FILIP1LQ4L180 1135 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 RAET1GQ6H3X3 334 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 ZNF571Q7Z3V5 609 aaPredicted RBP22.64■■□□□ 1.21
SSBP4-203ENST00000593641 TMPRSS9Q7Z410 1059 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 ATPAF2Q8N5M1 289 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 MGME1Q9BQP7 344 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 SEMA6CQ9H3T2 930 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 NOD2Q9HC29 1040 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 SPATS2LQ9NUQ6 558 aaKnown RBP22.64■■□□□ 1.21
SSBP4-203ENST00000593641 FOXJ2Q9P0K8 574 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 TAAR2Q9P1P5 351 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 MYO1AQ9UBC5 1043 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 SDK2Q58EX2 2172 aa22.64■■□□□ 1.21
SSBP4-203ENST00000593641 A0A1W2PQC6 194 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms