RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ZWILCHQ9H900 591 aa19.38■□□□□ 0.69
TRAF4-216ENST00000586813 SCINQ9Y6U3 715 aa19.38■□□□□ 0.69
TRAF4-216ENST00000586813 A0A1W2PQ67 120 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 TTC24A2A3L6 582 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-216ENST00000586813 AGRPO00253 132 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 CPP00450 1065 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 GZMAP12544 262 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 CR2P20023 1033 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 VIPR1P32241 457 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 HSPA9P38646 679 aaKnown RBP19.37■□□□□ 0.69
TRAF4-216ENST00000586813 E4F1Q66K89 784 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-216ENST00000586813 ZNF571Q7Z3V5 609 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-216ENST00000586813 TMPRSS9Q7Z410 1059 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 HEATR4Q86WZ0 1026 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 SLITRK4Q8IW52 837 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 PGBD5Q8N414 524 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 PDCD6IPQ8WUM4 868 aaKnown RBP19.37■□□□□ 0.69
TRAF4-216ENST00000586813 ZNF653Q96CK0 615 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 NUDCD1Q96RS6 583 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 CMKLR1Q99788 373 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 TEX101Q9BY14 249 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 CARS2Q9HA77 564 aaKnown RBP19.37■□□□□ 0.69
TRAF4-216ENST00000586813 RTN4Q9NQC3 1192 aaKnown RBP19.37■□□□□ 0.69
TRAF4-216ENST00000586813 PHPT1Q9NRX4 125 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-216ENST00000586813 PCDHGC4Q9Y5F7 938 aa19.37■□□□□ 0.69
TRAF4-216ENST00000586813 PRAMEF33A0A0G2JMD5 474 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 H3BRJ5 948 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 PRAMEF10O60809 474 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 HEXIM1O94992 359 aaKnown RBP19.36■□□□□ 0.69
TRAF4-216ENST00000586813 PEX11BO96011 259 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 CCNB1P14635 433 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 LHCGRP22888 699 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 IL1R2P27930 398 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 ETV5P41161 510 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 MAZP56270 477 aaKnown RBP19.36■□□□□ 0.69
TRAF4-216ENST00000586813 SRSF6Q13247 344 aaKnown RBP19.36■□□□□ 0.69
TRAF4-216ENST00000586813 DPYSL2Q16555 572 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 SMTNL2Q2TAL5 461 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 MAP9Q49MG5 647 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 PHF19Q5T6S3 580 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 TMCO3Q6UWJ1 677 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 GPBAR1Q8TDU6 330 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 DTD2Q96FN9 168 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 MGME1Q9BQP7 344 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 SUDS3Q9H7L9 328 aaPredicted RBP19.36■□□□□ 0.69
TRAF4-216ENST00000586813 SPATS2LQ9NUQ6 558 aaKnown RBP19.36■□□□□ 0.69
TRAF4-216ENST00000586813 KCTD5Q9NXV2 234 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 AIPL1Q9NZN9 384 aa19.36■□□□□ 0.69
TRAF4-216ENST00000586813 DDX3XO00571 662 aaKnown RBP eCLIP19.35■□□□□ 0.697e-11■■■■■ 53.4
TRAF4-216ENST00000586813 CEACAM5P06731 702 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 PCK1P35558 622 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 ARL4AP40617 200 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 PRKCIP41743 596 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 B4GALNT1Q00973 533 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 TYRO3Q06418 890 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 CCDC183Q5T5S1 534 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 DENND2CQ68D51 928 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 ZNF438Q7Z4V0 828 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 C17orf82Q86X59 251 aaPredicted RBP19.35■□□□□ 0.69
TRAF4-216ENST00000586813 NRROSQ86YC3 692 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 ZDHHC1Q8WTX9 485 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 SGF29Q96ES7 293 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 TRIM11Q96F44 468 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 GSDMCQ9BYG8 508 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 FRMD8Q9BZ67 464 aaPredicted RBP19.35■□□□□ 0.69
TRAF4-216ENST00000586813 SEMA6CQ9H3T2 930 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 RDH14Q9HBH5 336 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 NOD2Q9HC29 1040 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRAF4-216ENST00000586813 ETNK2Q9NVF9 386 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 FOXJ2Q9P0K8 574 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 MYO1AQ9UBC5 1043 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 BOD1L1Q8NFC6 3051 aa19.35■□□□□ 0.69
TRAF4-216ENST00000586813 NPIPB15A6NHN6 443 aaPredicted RBP19.34■□□□□ 0.69
TRAF4-216ENST00000586813 C9orf172C9J069 976 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 MAFKO60675 156 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 CPNE6O95741 557 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 FUCA1P04066 466 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 FGF1P05230 155 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 MYBL1P10243 752 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 KRT10P13645 584 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 TCF4P15884 667 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 AMPD1P23109 780 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 NFKBIAP25963 317 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 ETV3P41162 512 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 GNPDA1P46926 289 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 MAPK10P53779 464 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 CDK3Q00526 305 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 ILF3Q12906 894 aaKnown RBP eCLIP19.34■□□□□ 0.69
TRAF4-216ENST00000586813 TRAF2Q12933 501 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 NR1D2Q14995 579 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 C16orf72Q14CZ0 275 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 USP53Q70EK8 1073 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 HSD11B1LQ7Z5J1 315 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 POLNQ7Z5Q5 900 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 USP7Q93009 1102 aa19.34■□□□□ 0.69
TRAF4-216ENST00000586813 NAT10Q9H0A0 1025 aaKnown RBP19.34■□□□□ 0.69
TRAF4-216ENST00000586813 MRPL47Q9HD33 250 aaKnown RBP19.34■□□□□ 0.69
TRAF4-216ENST00000586813 TRNAU1APQ9NX07 287 aaKnown RBP19.34■□□□□ 0.69
TRAF4-216ENST00000586813 SEPT10Q9P0V9 454 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms