RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 BRCC3P46736 316 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 IFNAR2P48551 515 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 AFF3P51826 1226 aaKnown RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 NEK3P51956 506 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 EPHB3P54753 998 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 TPI1P60174 286 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 COG7P83436 770 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 SRSF3P84103 164 aaKnown RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 YWHAHQ04917 246 aaPredicted RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CDK18Q07002 472 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 ACTN3Q08043 901 aaPredicted RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CCDC15Q0P6D6 951 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 IFT88Q13099 833 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 NME3Q13232 169 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 BFSP2Q13515 415 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 SKIDA1Q1XH10 827 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 KBTBD12Q3ZCT8 623 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 GALNTL6Q49A17 601 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 FNDC3BQ53EP0 1204 aaKnown RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 PLEKHG4Q58EX7 1191 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CLLU1OSQ5K130 101 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 AFMIDQ63HM1 303 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 EGFLAMQ63HQ2 1017 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 ITPRIPL1Q6GPH6 555 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CCDC121Q6ZUS5 278 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 MARK2Q7KZI7 788 aaKnown RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 MILR1Q7Z6M3 343 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 SCD5Q86SK9 330 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 MON1AQ86VX9 555 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 SPATA2LQ8IUW3 424 aaPredicted RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 ZNF567Q8N184 647 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 COLGALT1Q8NBJ5 622 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 RAB3IL1Q8TBN0 382 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 RAET1EQ8TD07 263 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 DQX1Q8TE96 717 aaKnown RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 C2orf15Q8WU43 125 aaKnown RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 NDRG1Q92597 394 aaKnown RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 TGS1Q96RS0 853 aaKnown RBP6.24□□□□□ -1.41
PRKCA-205ENST00000583775 ZFYVE21Q9BQ24 234 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 TMEM175Q9BSA9 504 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 MAGEB5Q9BZ81 275 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 TRPV6Q9H1D0 765 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 FBXO44Q9H4M3 255 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CNTD2Q9H8S5 307 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 ANLNQ9NQW6 1124 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 HAUS2Q9NVX0 235 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 SAGE1Q9NXZ1 904 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CLIC5Q9NZA1 410 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CACNG4Q9UBN1 327 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 OR12D3Q9UGF7 316 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 TBK1Q9UHD2 729 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CBLCQ9ULV8 474 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 NEU3Q9UQ49 428 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 CHMP2BQ9UQN3 213 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 IRAK3Q9Y616 596 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 IKBKGQ9Y6K9 419 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 X6R8D5 127 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 MICAL3Q7RTP6 2002 aa6.24□□□□□ -1.41
PRKCA-205ENST00000583775 A0A1W2PPM1 405 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 FAM47E-STBD1D6RA91 191 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 FAM72CH0Y354 149 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 H7BY64 318 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 DNM1LO00429 736 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 EDF1O60869 148 aaKnown RBP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 EFCAB14O75071 495 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 BANF1O75531 89 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 KRT38O76015 456 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 TGDSO95455 350 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 MT-ND3P03897 115 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 ITGB1P05556 798 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 PGAM1P18669 254 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 CA4P22748 312 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 PTPN3P26045 913 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 CCR1P32246 355 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 RPA3P35244 121 aaPredicted RBP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 GARSP41250 739 aaKnown RBP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 SKIV2L2P42285 1042 aaKnown RBP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 NPY2RP49146 381 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 SLC5A3P53794 718 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 MLLT6P55198 1093 aaPredicted RBP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 ERVFRD-1P60508 538 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 YWHAGP61981 247 aaKnown RBP eCLIP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 NIPAL4Q0D2K0 466 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 ELAVL2Q12926 359 aaKnown RBP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 GPNMBQ14956 572 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 SLC1A5Q15758 541 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 TEX44Q53QW1 395 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 TRIM61Q5EBN2 209 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 SPANXN3Q5MJ09 141 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 FAM72AQ5TYM5 149 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 FAM72DQ6L9T8 149 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 PAQR3Q6TCH7 311 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 LRRC8DQ7L1W4 858 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 TRPM8Q7Z2W7 1104 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 SPATA21Q7Z572 469 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 KIAA0907Q7Z7F0 614 aaPredicted RBP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 PRPF39Q86UA1 669 aaKnown RBP6.23□□□□□ -1.41
PRKCA-205ENST00000583775 TMEM135Q86UB9 458 aa6.23□□□□□ -1.41
PRKCA-205ENST00000583775 TAC4Q86UU9 113 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms